Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12529_v3 Cicer arietinum L. HOM05D000196 ORTHO05D034596 2.1e-21 104.8 53 100.0
Ca_12530_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 1.8e-20 101.7 51 100.0
Psat6g046000 Pisum sativum HOM05D000196 ORTHO05D000279 1.3e-15 85.5 56 78.6
Medtr1g032570 Medicago truncatula HOM05D000196 ORTHO05D000279 1.4e-09 65.5 51 66.7
TPR.G36946 Trifolium pratense HOM05D000196 ORTHO05D000279 1.9e-09 65.1 38 78.9
Lj2g0001554 Lotus japonicus HOM05D000196 ORTHO05D000279 4.2e-09 63.9 56 58.9
Lj2g0013191 Lotus japonicus HOM05D000196 ORTHO05D000279 4.2e-09 63.9 56 58.9
unitig_26.g10580 Utricularia gibba HOM05D000196 ORTHO05D000279 7.1e-09 63.2 51 56.9
Phvul.003G017300 Phaseolus vulgaris HOM05D000196 ORTHO05D034596 9.3e-09 62.8 54 63.0
Lj2g0025525 Lotus japonicus HOM05D000196 ORTHO05D000279 1.2e-08 62.4 56 57.1
Glyma.02G085900 Glycine max HOM05D000196 ORTHO05D000279 1.6e-08 62.0 35 80.0
Glyma.07G171200 Glycine max HOM05D000196 ORTHO05D000279 2.1e-08 61.6 34 82.4
VMungo1215G0986 Vigna mungo HOM05D000196 ORTHO05D000279 2.7e-08 61.2 52 61.5
Lj2g0000841 Lotus japonicus HOM05D000196 ORTHO05D000279 7.9e-08 59.7 56 55.4
Phvul.003G017000 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 1.0e-07 59.3 47 66.0
unitig_749.g13376 Utricularia gibba HOM05D000196 ORTHO05D000279 1.0e-07 59.3 52 57.7
Dinv07718 Davidia involucrata HOM05D000196 ORTHO05D000279 1.1e-06 55.8 55 60.0
unitig_699.g19984 Utricularia gibba HOM05D000196 ORTHO05D000279 1.1e-06 55.8 37 64.9
HPP92_023444 Vanilla planifolia HOM05D000196 ORTHO05D000279 1.1e-06 55.8 50 58.0
HPP92_023467 Vanilla planifolia HOM05D000196 ORTHO05D034596 1.5e-06 55.5 51 56.9
Solyc05g054390.4 Solanum lycopersicum HOM05D000196 ORTHO05D000279 4.3e-06 53.9 39 64.1
Sopen05g032870 Solanum pennellii HOM05D000196 ORTHO05D000279 4.3e-06 53.9 39 64.1
Nn4g24408 Nelumbo nucifera HOM05D000196 ORTHO05D000279 7.4e-06 53.1 43 60.5
Rhsim09G0089000 Rhododendron simsii HOM05D000196 ORTHO05D000279 7.4e-06 53.1 38 65.8
CiPaw.06G053100 Carya illinoinensis HOM05D000196 ORTHO05D000279 9.6e-06 52.8 51 56.9
PGSC0003DMG400023534 Solanum tuberosum HOM05D000196 ORTHO05D000279 9.6e-06 52.8 39 64.1


User provided reference genes

Program Settings