Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 3.8e-32 141.0 74 100.0
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 3.8e-32 141.0 74 100.0
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 1.1e-31 139.4 74 98.6
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 3.2e-31 137.9 74 97.3
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 5.4e-31 137.1 74 95.9
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 7.1e-31 136.7 74 97.3
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 7.1e-31 136.7 74 94.6
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 7.1e-31 136.7 74 97.3
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 7.1e-31 136.7 74 97.3
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.6e-30 135.6 74 91.9
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 2.1e-30 135.2 74 93.2
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.7e-30 134.8 74 91.9
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 3.5e-30 134.4 74 93.2
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 3.5e-30 134.4 74 91.9
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 3.5e-30 134.4 74 94.6
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.5e-30 134.4 74 90.5
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 4.6e-30 134.0 74 93.2
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 4.6e-30 134.0 74 93.2
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 4.6e-30 134.0 74 91.9
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 6.0e-30 133.7 73 93.2
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 7.8e-30 133.3 74 91.9
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 7.8e-30 133.3 74 91.9
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.0e-29 132.9 74 93.2
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 1.0e-29 132.9 74 91.9
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.7e-29 132.1 74 91.9
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 1.7e-29 132.1 74 91.9
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 1.7e-29 132.1 74 91.9
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 1.7e-29 132.1 74 93.2
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 2.3e-29 131.7 71 93.0
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 2.3e-29 131.7 74 91.9
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 3.0e-29 131.3 74 91.9
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 3.0e-29 131.3 74 90.5
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 3.9e-29 131.0 74 91.9
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 6.6e-29 130.2 74 91.9
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 6.6e-29 130.2 74 91.9
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 6.6e-29 130.2 74 91.9
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 8.7e-29 129.8 74 90.5
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 1.1e-28 129.4 74 87.8
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.5e-28 129.0 74 90.5
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 1.9e-28 128.6 74 90.5
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 2.5e-28 128.3 74 89.2
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 3.3e-28 127.9 74 89.2
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 3.3e-28 127.9 74 89.2
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 4.3e-28 127.5 72 86.1
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 4.3e-28 127.5 74 87.8
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 5.6e-28 127.1 71 93.0
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 5.6e-28 127.1 74 86.5
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 9.6e-28 126.3 73 89.0
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 9.6e-28 126.3 74 86.5
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 1.3e-27 125.9 74 87.8
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.3e-27 125.9 74 87.8
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.3e-27 125.9 74 87.8
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 1.3e-27 125.9 74 86.5
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 1.3e-27 125.9 66 97.0
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 1.3e-27 125.9 74 87.8
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 1.6e-27 125.6 74 86.5
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 2.8e-27 124.8 74 85.1
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 6.2e-27 123.6 74 86.5
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 1.8e-26 122.1 74 85.1
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 1.8e-26 122.1 73 86.3
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 1.8e-26 122.1 74 83.8
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 5.3e-26 120.6 73 83.6
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 9.0e-26 119.8 71 83.1
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 2.6e-25 118.2 113 61.9
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 9.9e-25 116.3 73 79.5
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 9.9e-25 116.3 73 79.5
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 2.9e-24 114.8 74 78.4
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 6.4e-24 113.6 67 80.6
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 8.4e-24 113.2 73 78.1
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.1e-23 112.8 71 80.3
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 1.1e-23 112.8 73 80.8
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 1.4e-23 112.5 73 80.8
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 2.4e-23 111.7 73 79.5
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 9.3e-23 109.8 73 78.1
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.6e-22 109.0 72 75.0
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 1.6e-22 109.0 72 76.4
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 2.7e-22 108.2 73 76.7
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 2.7e-22 108.2 72 73.6
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 2.7e-22 108.2 72 73.6
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 7.8e-22 106.7 72 72.2
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 8.7e-21 103.2 54 92.6
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 1.1e-20 102.8 65 75.4
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 4.3e-20 100.9 71 70.4
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 1.3e-19 99.4 71 70.4
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 2.1e-19 98.6 71 67.6
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 3.6e-19 97.8 71 66.2
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 4.8e-19 97.4 72 70.8
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 1.1e-18 96.3 54 87.0
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.8e-18 95.5 71 64.8
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 1.9e-15 85.5 103 50.5
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 7.1e-15 83.6 74 59.5
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 9.3e-15 83.2 74 58.1
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 4.6e-14 80.9 73 57.5
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 7.9e-14 80.1 71 57.7
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 1.0e-13 79.7 67 56.7
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.8e-13 79.0 71 57.7
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 1.8e-13 79.0 71 57.7
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 2.3e-13 78.6 71 53.5
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 2.3e-13 78.6 43 81.4
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 8.7e-13 76.6 57 63.2
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 4.3e-12 74.3 44 84.1
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 8.1e-11 70.1 70 50.0
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 6.5e-08 60.5 67 46.3
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 1.9e-07 58.9 56 55.4
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 7.1e-07 57.0 56 53.6


User provided reference genes

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