Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.1e-30 136.7 116 100.0
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.5e-14 83.2 101 57.4
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.1e-13 77.8 91 69.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.0e-12 77.0 111 63.1
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.4e-12 76.6 89 64.0
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-12 76.6 89 52.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.8e-12 76.3 93 67.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.2e-11 73.6 89 75.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.2e-11 73.6 114 59.6
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.6e-11 72.4 89 74.2
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 5.7e-11 71.2 114 50.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 9.8e-11 70.5 89 56.2
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.3e-10 70.1 88 71.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.2e-10 69.3 91 70.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-10 68.9 104 58.7
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.7e-10 68.6 90 75.6
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 4.8e-10 68.2 90 75.6
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 4.8e-10 68.2 93 62.4
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 4.8e-10 68.2 87 67.8
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.1e-09 67.0 117 59.8
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 1.1e-09 67.0 116 65.5
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.4e-09 66.6 92 66.3
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.4e-09 66.6 92 66.3
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 2.4e-09 65.9 71 76.1
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 3.1e-09 65.5 121 63.6
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.1e-09 65.5 85 62.4
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 3.1e-09 65.5 113 64.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.4e-09 64.7 101 61.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 5.4e-09 64.7 101 61.4
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 5.4e-09 64.7 116 54.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 7.0e-09 64.3 91 62.6
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.1e-09 63.9 101 64.4
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.2e-08 63.5 93 62.4
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.2e-08 63.5 93 62.4
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 1.6e-08 63.2 90 68.9
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-08 63.2 85 71.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.6e-08 63.2 91 49.5
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 2.0e-08 62.8 70 67.1
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.0e-08 62.8 90 61.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 2.7e-08 62.4 112 58.9
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.7e-08 62.4 93 60.2
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 3.5e-08 62.0 73 80.8
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 4.5e-08 61.6 107 62.6
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.5e-08 61.6 88 61.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.7e-08 60.8 111 64.0
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.7e-08 60.8 89 41.6
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.0e-07 60.5 112 59.8
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.3e-07 60.1 88 68.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.3e-07 60.1 90 64.4
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.7e-07 59.7 90 72.2
Lalb_Chr19g0130221 Lupinus albus HOM05D002879 ORTHO05D002930 1.7e-07 59.7 102 67.6
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-07 59.7 88 69.3
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 2.3e-07 59.3 96 68.8
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 2.3e-07 59.3 90 50.0
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.9e-07 58.9 89 68.5
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 2.9e-07 58.9 88 68.2
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.9e-07 58.9 89 74.2
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.9e-07 58.9 89 74.2
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.9e-07 58.9 111 56.8
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 3.8e-07 58.5 92 55.4
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.8e-07 58.5 112 58.9
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.0e-07 58.2 90 65.6
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 5.0e-07 58.2 114 65.8
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 6.6e-07 57.8 111 60.4
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 6.6e-07 57.8 114 52.6
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.1e-06 57.0 91 70.3
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-06 57.0 105 64.8
Prupe.8G034200 Prunus persica HOM05D002879 ORTHO05D002930 1.1e-06 57.0 68 79.4
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 1.5e-06 56.6 65 84.6
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 1.5e-06 56.6 70 71.4
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.5e-06 56.6 63 69.8
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 91 63.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.9e-06 56.2 102 55.9
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.3e-06 55.5 114 63.2
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.3e-06 55.5 101 60.4
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 4.2e-06 55.1 45 62.2
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.2e-06 55.1 95 52.6
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.5e-06 54.7 89 64.0
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.5e-06 54.7 90 65.6
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.2e-06 54.3 44 81.8
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.2e-06 54.3 101 60.4
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 7.2e-06 54.3 100 67.0


User provided reference genes

Program Settings