Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 6.7e-52 207.2 117 100.0
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 1.8e-41 172.6 117 82.1
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 1.2e-40 169.9 117 82.1
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 2.3e-39 165.6 113 79.6
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 9.5e-38 160.2 132 72.7
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 2.8e-37 158.7 117 74.4
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 4.0e-36 154.8 117 73.5
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 6.8e-36 154.1 117 73.5
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 1.4e-33 146.4 114 70.2
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 5.9e-32 141.0 109 72.5
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 7.0e-25 117.5 100 64.0
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 2.0e-24 115.9 105 61.0
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 4.6e-24 114.8 118 57.6
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 8.6e-23 110.5 104 63.5
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 2.5e-22 109.0 121 52.1
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 4.3e-22 108.2 105 56.2
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 2.8e-21 105.5 105 56.2
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 6.2e-21 104.4 96 61.5
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 1.4e-20 103.2 96 61.5
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 4.0e-20 101.7 96 60.4
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 8.9e-20 100.5 94 59.6
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 1.5e-19 99.8 96 63.5
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 3.4e-19 98.6 96 58.3
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 3.4e-19 98.6 96 58.3
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 4.4e-19 98.2 94 57.4
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 1.3e-18 96.7 92 62.0
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 1.7e-18 96.3 96 57.3
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 1.7e-18 96.3 107 53.3
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 2.2e-18 95.9 103 52.4
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 2.9e-18 95.5 90 57.8
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 4.9e-18 94.7 102 54.9
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 4.9e-18 94.7 92 58.7
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 4.9e-18 94.7 95 57.9
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 8.3e-18 94.0 90 56.7
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 1.4e-17 93.2 99 56.6
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 1.4e-17 93.2 109 48.6
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 2.4e-17 92.4 91 57.1
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.2e-17 92.0 100 54.0
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.2e-17 92.0 100 54.0
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 4.1e-17 91.7 90 56.7
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 4.1e-17 91.7 102 52.0
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 5.4e-17 91.3 97 56.7
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 4.6e-16 88.2 95 58.9
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 6.0e-16 87.8 96 55.2
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 7.8e-16 87.4 102 50.0
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 7.8e-16 87.4 96 54.2
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 7.8e-16 87.4 82 63.4
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 1.0e-15 87.0 99 55.6
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 2.3e-15 85.9 128 46.1
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 3.0e-15 85.5 128 46.1
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 5.1e-15 84.7 97 53.6
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 8.6e-15 84.0 97 48.5
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 1.1e-14 83.6 140 42.9
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 4.3e-14 81.6 97 47.4
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 5.6e-14 81.3 85 58.8
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 7.3e-14 80.9 97 47.4
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 7.3e-14 80.9 97 47.4
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.2e-13 80.1 101 47.5
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 1.6e-13 79.7 97 46.4
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 1.6e-13 79.7 97 46.4
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.6e-13 79.7 101 47.5
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 6.2e-13 77.8 69 60.9
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 6.2e-13 77.8 98 50.0
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 6.2e-13 77.8 96 51.0
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 8.1e-13 77.4 101 45.5
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 8.1e-13 77.4 101 47.5
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 1.4e-12 76.6 96 51.0
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 1.4e-12 76.6 96 50.0
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 1.8e-12 76.3 93 51.6
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.8e-12 76.3 96 51.0
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 1.8e-12 76.3 92 46.7
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 2.3e-12 75.9 92 50.0
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 2.3e-12 75.9 94 50.0
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 2.3e-12 75.9 89 52.8
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 3.1e-12 75.5 92 48.9
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 4.0e-12 75.1 90 47.8
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 4.0e-12 75.1 90 45.6
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 6.8e-12 74.3 94 48.9
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 8.9e-12 73.9 93 48.4
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 1.2e-11 73.6 91 47.3
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 1.2e-11 73.6 91 50.5
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 4.4e-11 71.6 97 49.5
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 7.5e-11 70.9 102 46.1
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 6.4e-10 67.8 93 44.1
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 1.1e-09 67.0 94 46.8
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 1.4e-09 66.6 95 44.2
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 2.7e-08 62.4 98 43.9
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 6.0e-08 61.2 119 39.5
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 5.1e-07 58.2 98 42.9
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 6.6e-07 57.8 82 45.1
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 8.6e-07 57.4 86 45.3
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 1.1e-06 57.0 150 32.7
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 1.1e-06 57.0 87 44.8
AUR62024507 Chenopodium quinoa HOM05D007492 ORTHO05D009510 2.5e-06 55.8 105 41.0
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 9.5e-06 53.9 91 42.9


User provided reference genes

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