Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.0e-122 443.4 211 100.0
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 8.0e-104 380.6 214 86.9
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 3.5e-99 365.2 216 83.8
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 2.9e-93 345.5 211 76.3
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.1e-89 333.6 214 75.2
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.3e-87 325.9 212 75.9
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 8.9e-87 323.9 215 74.0
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 3.4e-86 322.0 213 72.3
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 4.4e-86 321.6 213 75.1
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 4.4e-86 321.6 213 73.2
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 3.8e-77 292.0 172 77.9
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.4e-77 291.2 181 75.1
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.1e-76 290.4 228 64.5
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 4.2e-76 288.5 164 79.3
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 5.4e-76 288.1 164 79.3
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 9.3e-76 287.3 164 79.3
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 2.1e-75 286.2 210 64.8
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 4.6e-75 285.0 226 64.6
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 4.6e-75 285.0 226 64.6
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 7.8e-75 284.3 170 75.9
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.3e-74 283.5 226 63.7
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.3e-74 282.7 163 75.5
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 5.1e-74 281.6 190 69.5
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 5.1e-74 281.6 223 64.1
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 8.7e-74 280.8 199 64.3
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.9e-73 279.6 215 64.2
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 2.5e-73 279.3 162 76.5
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 4.3e-73 278.5 224 62.1
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 7.3e-73 277.7 224 62.5
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 73.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 73.4
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 73.4
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 73.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.3e-72 276.9 169 73.4
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.6e-72 276.6 216 62.5
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.6e-72 276.6 225 61.8
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 2.8e-72 275.8 169 72.8
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 2.8e-72 275.8 169 72.8
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 6.2e-72 274.6 193 65.8
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 6.9e-71 271.2 237 57.0
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 2.0e-70 269.6 174 68.4
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 2.6e-70 269.2 198 62.6
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 3.4e-70 268.9 169 69.8
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 7.6e-70 267.7 166 71.1
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.9e-70 267.3 206 60.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.3e-69 266.9 174 70.1
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 1.7e-69 266.5 208 61.5
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.9e-69 265.8 166 70.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 3.8e-69 265.4 193 65.8
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 3.8e-69 265.4 186 66.1
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 4.9e-69 265.0 211 59.7
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.9e-68 263.1 169 71.0
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 1.9e-68 263.1 217 58.1
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 2.4e-68 262.7 169 70.4
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.2e-68 262.3 169 70.4
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.2e-68 262.3 164 71.3
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 4.2e-68 261.9 166 70.5
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 5.4e-68 261.5 201 61.7
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 5.4e-68 261.5 201 61.7
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 7.1e-68 261.2 211 60.2
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 2.1e-67 259.6 164 72.6
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 3.5e-67 258.8 169 68.6
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 3.5e-67 258.8 175 67.4
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 3.5e-67 258.8 166 71.1
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 4.6e-67 258.5 174 65.5
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 6.0e-67 258.1 172 64.5
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 3.0e-66 255.8 166 69.3
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 6.6e-66 254.6 164 68.3
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 9.6e-65 250.8 166 66.9
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 9.6e-65 250.8 171 66.7
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.1e-64 249.6 206 56.3
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.1e-64 249.6 169 66.9
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 6.2e-64 248.1 207 56.0
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.4e-63 246.9 214 56.1
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 2.4e-63 246.1 158 67.7
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 3.1e-63 245.7 182 64.3
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 5.3e-63 245.0 214 58.4
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 6.9e-63 244.6 162 65.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 6.4e-61 238.0 139 77.7
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 6.4e-61 238.0 213 60.6
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 3.2e-60 235.7 228 51.3
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 7.1e-60 234.6 127 81.9
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.6e-59 233.4 158 66.5
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 7.9e-59 231.1 326 43.6
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.3e-58 230.3 199 54.8
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 1.5e-57 226.9 137 81.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 9.0e-55 217.6 200 52.5
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 2.3e-50 203.0 110 84.5
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 6.7e-50 201.4 104 85.6
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 2.5e-49 199.5 169 53.8
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 5.7e-49 198.4 104 84.6
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 9.0e-47 191.0 168 56.0
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 4.2e-44 182.2 119 71.4
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.7e-37 160.2 146 52.7
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 5.1e-34 148.7 216 44.0
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 7.9e-27 124.8 77 74.0
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 3.3e-25 119.4 89 60.7
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 2.2e-24 116.7 146 43.2
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 6.3e-24 115.2 118 48.3
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 6.1e-19 98.6 73 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 8.0e-19 98.2 137 40.9
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 7.5e-17 91.7 131 40.5
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.0e-13 81.3 41 85.4
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 2.5e-12 76.6 136 39.0


User provided reference genes

Program Settings