Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.5e-135 484.6 240 100.0
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.5e-135 484.6 240 100.0
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.9e-117 426.0 218 96.3
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 2.1e-116 422.5 218 95.4
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.3e-115 419.1 218 94.0
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 4.0e-115 418.3 218 92.7
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 6.7e-115 417.5 218 93.6
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.6e-114 415.6 218 93.6
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 9.7e-114 413.7 218 92.2
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 2.8e-113 412.1 218 91.3
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.4e-112 409.8 218 90.8
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 3.1e-112 408.7 218 91.3
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.1e-112 408.3 218 91.7
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 5.3e-112 407.9 218 90.8
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 9.1e-112 407.1 218 90.8
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.2e-111 406.8 217 90.8
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.6e-111 406.4 218 90.4
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.7e-111 405.6 218 89.0
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 3.5e-111 405.2 217 90.8
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 4.5e-111 404.8 218 88.1
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 5.9e-111 404.4 218 89.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 7.7e-111 404.1 218 89.9
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 7.7e-111 404.1 218 89.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.0e-110 403.7 218 89.0
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.3e-110 403.3 218 89.0
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.2e-110 402.5 218 89.4
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 2.2e-110 402.5 218 89.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.2e-110 402.5 218 89.0
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.9e-110 402.1 218 89.4
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 3.8e-110 401.7 218 89.4
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 3.8e-110 401.7 218 89.4
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 5.0e-110 401.4 218 88.5
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 6.5e-110 401.0 218 89.9
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 6.5e-110 401.0 218 89.0
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 6.5e-110 401.0 218 89.0
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.5e-110 401.0 218 88.5
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 8.5e-110 400.6 218 88.1
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 8.5e-110 400.6 218 87.6
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.1e-109 400.2 218 89.9
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.1e-109 400.2 218 89.0
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.5e-109 399.8 216 88.0
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.5e-109 399.8 216 88.0
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.5e-109 399.8 216 88.0
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.5e-109 399.8 216 88.0
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.5e-109 399.8 216 88.0
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.5e-109 399.8 218 87.2
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.5e-109 399.8 218 89.0
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.5e-109 399.8 218 87.6
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 1.5e-109 399.8 218 88.5
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.9e-109 399.4 218 89.0
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.5e-109 399.1 218 87.6
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.5e-109 399.1 218 87.6
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 2.5e-109 399.1 218 88.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.2e-109 398.7 218 88.1
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 3.2e-109 398.7 218 86.7
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 4.2e-109 398.3 218 88.1
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 4.2e-109 398.3 218 88.1
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 4.2e-109 398.3 218 86.7
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.2e-109 398.3 218 88.5
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 5.5e-109 397.9 218 89.0
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.2e-109 397.5 218 88.1
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.2e-108 396.7 211 91.0
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.2e-108 396.7 218 87.6
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.2e-108 396.7 216 87.0
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.6e-108 396.4 215 88.4
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.6e-108 396.4 216 88.4
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 2.1e-108 396.0 218 86.2
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 2.7e-108 395.6 216 86.6
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 3.6e-108 395.2 218 85.8
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 3.6e-108 395.2 216 87.0
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 3.6e-108 395.2 218 87.2
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 3.6e-108 395.2 218 88.1
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 4.7e-108 394.8 218 85.8
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 4.7e-108 394.8 218 85.8
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 4.7e-108 394.8 218 88.1
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.1e-108 394.4 218 87.6
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.1e-108 394.4 218 87.6
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 6.1e-108 394.4 218 87.6
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 8.0e-108 394.0 218 86.2
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 8.0e-108 394.0 218 86.2
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 8.0e-108 394.0 218 88.1
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-107 393.3 218 88.1
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.4e-107 393.3 216 87.0
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.4e-107 393.3 218 87.6
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.8e-107 392.9 218 87.6
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 1.8e-107 392.9 218 85.8
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.8e-107 392.9 218 87.2
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 2.3e-107 392.5 216 87.5
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.0e-107 391.7 218 86.7
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 1.2e-106 390.2 228 85.1
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.5e-106 389.8 218 86.7
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.5e-106 389.8 218 86.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 2.0e-106 389.4 212 87.7
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 2.6e-106 389.0 218 86.7
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 7.5e-106 387.5 216 86.1
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 7.5e-106 387.5 216 87.0
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 9.8e-106 387.1 212 86.8
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 9.8e-106 387.1 218 85.8
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.3e-105 386.7 216 87.5
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.3e-105 386.7 218 84.4
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 6.3e-105 384.4 224 85.3
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 8.3e-105 384.0 216 83.8
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 1.8e-104 382.9 218 83.5
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.4e-104 382.5 218 85.8
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 3.1e-104 382.1 218 84.4
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 3.1e-104 382.1 218 85.3
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 4.1e-104 381.7 218 85.3
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 5.4e-104 381.3 218 83.5
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.5e-103 378.6 218 84.9
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 4.5e-103 378.3 204 90.7
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 7.7e-103 377.5 218 84.9
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.0e-102 377.1 217 85.7
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.9e-102 375.6 218 85.3
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.8e-102 375.2 216 83.3
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 5.0e-102 374.8 218 83.5
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 5.0e-102 374.8 245 75.9
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 8.5e-102 374.0 214 84.1
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.5e-101 373.2 218 82.6
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 5.5e-101 371.3 200 89.0
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 8.0e-100 367.5 200 89.0
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.7e-97 359.8 218 83.5
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.4e-96 356.7 231 77.9
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.3e-94 349.4 218 79.4
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 6.6e-94 347.8 218 76.1
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.1e-93 347.1 200 84.5
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.1e-93 347.1 215 80.9
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 8.0e-92 340.9 189 86.8
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 1.0e-91 340.5 182 90.7
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 5.2e-91 338.2 218 72.0
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 8.9e-91 337.4 189 86.2
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 8.9e-91 337.4 179 88.8
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 2.0e-90 336.3 182 90.7
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.7e-89 333.2 218 72.0
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.2e-89 332.8 219 72.6
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 6.4e-89 331.3 187 86.1
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.4e-88 330.1 208 80.3
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 2.4e-88 329.3 218 77.5
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.7e-87 325.9 209 76.6
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.8e-83 313.2 218 68.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 3.4e-82 308.9 174 86.8
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.8e-76 289.3 218 72.9
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.7e-73 280.0 152 90.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 6.0e-71 271.6 156 83.3
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.1e-70 268.5 224 64.3
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.5e-63 245.7 146 82.9
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 8.1e-60 234.6 209 62.2
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 3.9e-54 215.7 118 85.6
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 4.3e-53 212.2 162 66.0
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 8.7e-46 188.0 119 73.1
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.5e-45 187.2 158 62.7
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 4.3e-45 185.7 136 71.3
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.2e-42 177.6 181 57.5
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 2.7e-39 166.4 105 74.3
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 2.4e-35 153.3 87 81.6
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 2.6e-34 149.8 96 72.9
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.9e-33 146.4 175 47.4
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 4.6e-31 139.0 204 44.6
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 2.9e-25 119.8 170 43.5
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 5.0e-25 119.0 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 5.0e-25 119.0 66 87.9
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 8.2e-20 101.7 266 32.3
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.1e-15 87.0 45 88.9
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 2.1e-15 87.0 158 38.0
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-14 84.0 85 52.9
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 2.6e-13 80.1 79 54.4
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 5.7e-13 79.0 92 48.9
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.1e-11 74.7 44 77.3
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.1e-11 74.7 110 41.8
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 6.9e-11 72.0 103 41.7
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.1e-08 64.7 43 76.7
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.2e-07 61.2 34 82.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.6e-07 60.8 40 75.0
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 3.6e-07 59.7 57 52.6
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 4.7e-07 59.3 38 76.3


User provided reference genes

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