Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12180_v3 Cicer arietinum L. HOM05D009301 ORTHO05D010417 2.6e-47 191.8 104 100.0
Medtr3g053510 Medicago truncatula HOM05D009301 ORTHO05D010417 3.9e-35 151.4 102 79.4
Lj6g0015699 Lotus japonicus HOM05D009301 ORTHO05D010417 2.4e-32 142.1 102 72.5
Glyma.18G091900 Glycine max HOM05D009301 ORTHO05D010417 5.8e-31 137.5 101 73.3
Glyma.08G320400 Glycine max HOM05D009301 ORTHO05D010417 1.3e-30 136.3 102 74.5
Psat5g175320 Pisum sativum HOM05D009301 ORTHO05D010417 6.5e-30 134.0 99 72.7
Lalb_Chr15g0081541 Lupinus albus HOM05D009301 ORTHO05D010417 3.2e-29 131.7 102 69.6
Phvul.006G047400 Phaseolus vulgaris HOM05D009301 ORTHO05D010417 6.9e-24 114.0 104 67.3
TPR.G32240 Trifolium pratense HOM05D009301 ORTHO05D010417 1.5e-23 112.8 99 66.7
LjContig00272g0016930 Lotus japonicus HOM05D009301 ORTHO05D010417 3.8e-22 108.2 100 62.0
Phvul.008G270800 Phaseolus vulgaris HOM05D009301 ORTHO05D010417 7.2e-21 104.0 101 58.4
VMungo0540G0911 Vigna mungo HOM05D065029 ORTHO05D010417 9.7e-18 93.6 87 67.8
Lalb_Chr10g0107111 Lupinus albus HOM05D009301 ORTHO05D010417 1.1e-16 90.1 103 50.5
arahy.Tifrunner.gnm1.ann1.6CSL00 Arachis hypogaea HOM05D009301 ORTHO05D010417 1.3e-14 83.2 105 51.4
arahy.Tifrunner.gnm1.ann1.SZC25R Arachis hypogaea HOM05D009301 ORTHO05D010417 5.5e-13 77.8 101 49.5
Lalb_Chr17g0348671 Lupinus albus HOM05D009301 ORTHO05D010417 5.5e-13 77.8 110 53.6
QL06p008751 Quercus lobata HOM05D009301 ORTHO05D010417 9.4e-13 77.0 94 50.0
Prupe.4G221600 Prunus persica HOM05D016346 ORTHO05D010417 2.1e-12 75.9 96 54.2
Ciclev10009911m.g Citrus clementina HOM05D009301 ORTHO05D010417 1.0e-11 73.6 104 45.2
Dinv40790 Davidia involucrata HOM05D009301 ORTHO05D010417 1.4e-11 73.2 99 48.5
Atru.chr2.3506 Acer truncatum HOM05D009301 ORTHO05D010417 1.8e-11 72.8 88 50.0
MD03G1195000 Malus domestica HOM05D009301 ORTHO05D010417 3.9e-11 71.6 94 50.0
Ciclev10009912m.g Citrus clementina HOM05D009301 ORTHO05D010417 4.3e-10 68.2 100 46.0
FAN25G2362 Fragaria x ananassa HOM05D016346 ORTHO05D010417 5.7e-10 67.8 99 48.5
Glyma.02G293700 Glycine max HOM05D009301 ORTHO05D010417 9.7e-10 67.0 106 43.4
RcHm_v2.0_Chr5g0041161 Rosa chinensis HOM05D016346 ORTHO05D010417 9.7e-10 67.0 101 46.5
GSVIVG01037708001 Vitis vinifera HOM05D009301 ORTHO05D010417 6.3e-09 64.3 107 43.0
CiPaw.11G193700 Carya illinoinensis HOM05D009301 ORTHO05D010417 1.1e-08 63.5 100 45.0
Haze_09729 Corylus avellana HOM05D009301 ORTHO05D010417 1.8e-08 62.8 79 48.1
FvH4_3g23370 Fragaria vesca HOM05D016346 ORTHO05D010417 2.4e-08 62.4 104 47.1
FAN11G0684 Fragaria x ananassa HOM05D016346 ORTHO05D010417 2.4e-08 62.4 104 47.1
Haze_09728 Corylus avellana HOM05D009301 ORTHO05D010417 4.1e-08 61.6 79 46.8
Oeu007634.1 Olea europaea HOM05D009301 ORTHO05D010417 4.1e-08 61.6 93 44.1
FAN16G0490 Fragaria x ananassa HOM05D016346 ORTHO05D010417 1.5e-07 59.7 102 47.1
FAN21G3539 Fragaria x ananassa HOM05D016346 ORTHO05D010417 1.5e-07 59.7 102 47.1
Manes.03G132600 Manihot esculenta HOM05D009301 ORTHO05D010417 1.5e-07 59.7 86 47.7
Sc03g0008400 Simmondsia chinensis HOM05D055092 ORTHO05D010417 2.0e-07 59.3 101 39.6
Solyc07g064860.2 Solanum lycopersicum HOM05D017939 ORTHO05D010417 2.2e-06 55.8 105 42.9
CANSAT11G0718 Cannabis sativa HOM05D009301 ORTHO05D010417 2.9e-06 55.5 103 42.7


User provided reference genes

Program Settings