Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 4.5e-136 488.0 264 100.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 8.4e-135 483.8 264 99.6
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 3.0e-116 422.2 265 85.3
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 2.6e-112 409.1 256 87.1
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 7.7e-112 407.5 259 85.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 3.5e-104 382.1 270 78.5
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 1.7e-103 379.8 258 79.8
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.0e-101 370.9 269 78.1
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.6e-93 346.7 266 72.6
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 4.7e-93 345.1 247 76.1
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 4.0e-92 342.0 270 72.2
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 5.0e-87 325.1 268 70.1
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 2.7e-85 319.3 268 65.7
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 8.0e-85 317.8 264 67.8
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.5e-83 313.5 252 70.6
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 5.7e-83 311.6 264 64.0
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.3e-82 310.5 252 65.9
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.7e-82 310.1 269 65.4
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.9e-82 308.5 222 75.2
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 6.3e-82 308.1 254 66.9
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.4e-81 306.2 251 68.5
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 4.1e-81 305.4 254 67.7
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.6e-80 303.5 263 65.0
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 2.0e-80 303.1 264 63.6
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.7e-80 302.8 263 64.6
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 3.5e-80 302.4 253 68.0
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 4.5e-80 302.0 256 64.1
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.3e-79 300.4 265 64.9
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.3e-79 300.4 266 63.9
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-79 299.7 224 75.4
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.9e-79 299.3 266 63.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 5.0e-79 298.5 269 63.9
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 1.1e-78 297.4 255 62.7
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.2e-77 293.9 264 65.2
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 2.1e-77 293.1 273 61.2
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.8e-77 292.7 250 63.6
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.8e-77 292.7 256 62.5
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.0e-77 291.2 256 62.5
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.0e-76 289.3 260 63.5
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.0e-76 288.9 251 62.5
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.2e-76 288.5 259 59.8
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.2e-76 288.5 199 76.4
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 8.9e-76 287.7 246 63.4
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.2e-75 287.3 257 61.5
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.2e-75 287.3 254 63.8
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.5e-75 287.0 270 61.1
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 4.9e-74 282.0 255 60.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 6.4e-74 281.6 255 60.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.8e-73 280.0 248 60.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 4.1e-73 278.9 255 60.0
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 5.4e-73 278.5 247 67.2
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 7.0e-73 278.1 259 59.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-72 276.9 259 59.1
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.6e-72 276.9 259 59.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.6e-72 276.9 253 62.5
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.0e-72 276.6 250 61.2
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.7e-72 276.2 256 58.2
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 2.7e-72 276.2 253 59.7
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.7e-72 276.2 255 60.4
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.7e-72 276.2 251 61.8
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 3.5e-72 275.8 253 59.7
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 5.9e-72 275.0 260 59.6
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.0e-71 274.2 252 62.3
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.0e-71 274.2 256 59.0
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.0e-71 271.9 250 60.8
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 6.6e-71 271.6 283 58.0
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.9e-70 270.0 261 59.4
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 1.9e-70 270.0 254 61.0
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 2.5e-70 269.6 267 57.3
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 8.0e-69 264.6 249 59.4
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 8.0e-69 264.6 256 60.2
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 8.0e-69 264.6 238 66.0
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 7.5e-67 258.1 253 57.7
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 9.8e-67 257.7 266 57.1
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.3e-66 257.3 272 57.0
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.2e-66 256.5 252 59.9
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.4e-65 253.8 251 58.2
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.0e-64 248.4 258 58.1
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.7e-63 246.9 252 60.3
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 3.9e-63 245.7 253 56.1
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 6.6e-63 245.0 202 64.4
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 7.3e-62 241.5 252 57.1
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.1e-61 240.0 253 55.7
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 8.1e-61 238.0 247 58.7
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.4e-60 237.3 205 61.5
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 6.8e-60 235.0 252 54.8
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 6.8e-60 235.0 251 53.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 3.4e-59 232.6 204 62.3
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 9.8e-59 231.1 251 53.4
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 2.2e-58 229.9 238 56.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 2.4e-57 226.5 237 56.5
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.7e-55 220.3 252 54.4
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.5e-54 216.5 221 56.6
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.2e-53 214.2 252 53.6
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 6.4e-50 201.8 244 48.4
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.3e-47 194.1 257 44.7
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.2e-45 187.6 189 54.5
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.1e-45 184.9 156 64.7
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 4.0e-44 182.6 257 42.0
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 6.8e-44 181.8 161 60.2
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.0e-43 180.3 255 43.9
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 5.8e-43 178.7 129 73.6
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 1.1e-41 174.5 254 45.7
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.6e-40 169.1 152 56.6
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 6.2e-37 158.7 270 37.8
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 6.9e-36 155.2 276 40.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.6e-35 153.3 161 55.3
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.2e-34 150.2 221 48.9
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 3.2e-33 146.4 256 41.0
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-28 129.4 119 63.0
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-28 129.4 119 63.0
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.5e-27 125.9 163 50.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 7.6e-27 125.2 256 39.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.0e-23 114.8 163 42.3
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.9e-17 94.0 333 28.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 7.9e-16 88.6 166 38.0
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 1.3e-10 71.2 125 40.0
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.1e-09 68.2 57 56.1
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 1.4e-09 67.8 45 64.4
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 5.5e-09 65.9 111 39.6
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 1.5e-06 57.8 65 43.1
arahy.Tifrunner.gnm1.ann1.YLS7HT Arachis hypogaea HOM05D006823 ORTHO05D008608 2.5e-06 57.0 43 69.8


User provided reference genes

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