Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11801_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 7.3e-201 703.7 371 100.0
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 1.4e-159 566.6 340 83.2
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 3.4e-158 562.0 340 83.8
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 3.4e-158 562.0 340 83.2
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 1.1e-156 557.0 342 80.1
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 9.3e-156 553.9 342 79.5
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 1.6e-155 553.1 341 82.4
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 3.9e-154 548.5 340 81.8
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 6.7e-154 547.7 340 80.9
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 6.3e-152 541.2 340 79.1
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 5.9e-142 508.1 340 72.9
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 1.3e-141 506.9 340 73.8
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 1.6e-139 500.0 340 71.8
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 1.4e-138 496.9 340 72.9
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 2.5e-137 492.7 340 71.2
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 1.3e-136 490.3 340 70.6
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 1.7e-136 490.0 340 71.2
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 4.8e-136 488.4 340 70.0
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 4.8e-136 488.4 340 72.1
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 4.8e-136 488.4 340 70.6
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 8.2e-136 487.6 340 69.4
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 8.2e-136 487.6 340 71.5
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.1e-135 487.3 340 70.9
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 3.1e-135 485.7 340 69.4
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 4.1e-135 485.3 340 71.2
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 4.1e-135 485.3 344 71.5
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 5.3e-135 485.0 356 68.3
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 9.1e-135 484.2 340 69.4
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 9.1e-135 484.2 341 71.3
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.2e-134 483.8 347 71.2
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 5.9e-134 481.5 340 69.4
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 5.9e-134 481.5 344 71.2
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 1.0e-133 480.7 342 69.9
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 1.3e-133 480.3 340 71.2
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 2.9e-133 479.2 340 69.7
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 5.0e-133 478.4 344 70.1
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 1.9e-132 476.5 340 69.4
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 2.5e-132 476.1 340 69.4
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 1.6e-131 473.4 343 69.1
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 1.6e-131 473.4 340 68.8
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 2.1e-131 473.0 343 69.1
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 1.0e-130 470.7 340 68.8
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 1.0e-130 470.7 340 68.5
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 2.0e-129 466.5 344 68.9
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 9.7e-129 464.2 338 68.0
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 2.2e-128 463.0 340 69.4
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 6.3e-128 461.5 340 68.5
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 6.3e-128 461.5 340 68.5
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 1.1e-127 460.7 341 68.0
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 1.1e-127 460.7 340 67.6
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 1.8e-127 459.9 343 67.1
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 3.1e-127 459.1 341 67.2
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 5.3e-127 458.4 341 67.2
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 7.0e-127 458.0 339 68.1
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 1.6e-126 456.8 346 66.5
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 2.6e-126 456.1 341 66.9
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 2.6e-126 456.1 348 68.7
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 3.5e-126 455.7 341 66.9
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 5.9e-126 454.9 346 66.2
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 1.7e-125 453.4 350 65.4
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 1.7e-125 453.4 346 65.9
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 1.7e-125 453.4 341 66.3
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 6.5e-125 451.4 344 66.3
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 1.5e-124 450.3 340 66.2
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 2.5e-124 449.5 344 66.0
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 3.2e-124 449.1 332 67.5
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 9.4e-124 447.6 342 64.6
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 1.6e-123 446.8 342 64.6
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 1.6e-123 446.8 340 65.0
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 2.1e-123 446.4 340 64.4
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 2.7e-123 446.0 338 65.7
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 4.7e-123 445.3 326 68.4
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 6.1e-123 444.9 374 62.6
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 2.3e-122 443.0 340 63.8
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 3.0e-122 442.6 370 61.9
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 5.2e-122 441.8 338 66.0
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 1.5e-121 440.3 330 66.4
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 1.4e-119 433.7 358 62.6
Hma1.2p1_0279F.1_g112640 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 9.1e-119 431.0 306 70.3
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 1.5e-116 423.7 341 62.8
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 2.5e-116 422.9 339 62.8
FAN05G4989 Fragaria x ananassa HOM05D005888 ORTHO05D007791 7.2e-116 421.4 329 65.0
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 4.7e-115 418.7 351 61.8
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 1.0e-114 417.5 340 63.8
CAN.G1751.4 Capsicum annuum HOM05D005888 ORTHO05D007791 2.3e-114 416.4 303 68.0
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 3.1e-111 406.0 339 58.7
TAR374G0091 Trochodendron aralioides HOM05D005888 ORTHO05D007791 5.0e-109 398.7 286 70.3
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.5e-108 396.4 338 60.4
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 2.6e-105 386.3 338 56.2
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 3.7e-104 382.5 341 57.5
VMungo1383G0859 Vigna mungo HOM05D005888 ORTHO05D007791 2.7e-102 376.3 219 86.8
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 3.7e-96 355.9 327 58.1
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 5.9e-94 348.6 346 51.7
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 1.6e-91 340.5 341 49.0
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 2.6e-89 333.2 340 49.4
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 2.4e-87 326.6 344 53.5
CBR_g38076 Chara braunii HOM05D005888 ORTHO05D007791 1.6e-86 323.9 345 48.1
Os01g0920300 Oryza sativa ssp. japonica HOM05D005888 ORTHO05D007791 1.7e-85 320.5 282 56.4
Actinidia36191 Actinidia chinensis HOM05D005888 ORTHO05D007791 8.1e-83 311.6 250 64.8
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 8.3e-80 301.6 341 48.4
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 1.9e-79 300.4 317 47.0
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 2.1e-78 297.0 338 49.7
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.0e-61 241.5 273 47.6
BcaC06g31013 Brassica carinata HOM05D005888 ORTHO05D007791 4.6e-54 216.1 179 62.6
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 1.5e-52 211.1 177 61.6
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 6.2e-51 205.7 111 82.9
Atru.chr6.2542 Acer truncatum HOM05D005888 ORTHO05D007791 2.3e-37 160.6 140 59.3
CSS0026485 Camellia sinensis var. sinensis HOM05D005888 ORTHO05D007791 4.3e-36 156.4 97 75.3
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 2.5e-31 140.6 288 32.3
RcHm_v2.0_Chr7g0179331 Rosa chinensis HOM05D005888 ORTHO05D007791 6.5e-24 115.9 92 66.3
SEGI_20285 Sequoiadendron giganteum HOM05D005888 ORTHO05D007791 1.1e-20 105.1 73 63.0
PRCOL_00001844 Prasinoderma coloniale HOM05D005888 ORTHO05D007791 1.5e-20 104.8 285 30.2
Cre13.g578012 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 3.3e-20 103.6 233 30.0
GSVIVG01033112001 Vitis vinifera HOM05D005888 ORTHO05D007791 2.2e-16 90.9 65 61.5
GSVIVG01006789001 Vitis vinifera HOM05D005888 ORTHO05D007791 3.9e-13 80.1 76 57.9
Atru.chr6.2543 Acer truncatum HOM05D005888 ORTHO05D007791 4.1e-10 70.1 65 61.5
Pp3s32_330 Physcomitrium patens HOM05D005216 ORTHO05D006453 1.6e-09 68.2 272 25.4
RcHm_v2.0_Chr7g0239971 Rosa chinensis HOM05D005888 ORTHO05D007791 1.9e-07 61.2 54 51.9
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 2.1e-06 57.8 33 75.8


User provided reference genes

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