Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11786_v3 Cicer arietinum L. HOM05D010195 ORTHO05D000088 4.1e-127 458.0 217 100.0
Psat6g109080 Pisum sativum HOM05D010195 ORTHO05D000088 7.3e-76 287.7 266 53.4
Medtr1g046340 Medicago truncatula HOM05D010195 ORTHO05D000088 9.5e-76 287.3 336 45.8
Medtr1g046200 Medicago truncatula HOM05D010195 ORTHO05D000088 2.0e-73 279.6 325 45.2
TPR.G23993 Trifolium pratense HOM05D010195 ORTHO05D000088 1.7e-72 276.6 316 46.8
Medtr1g046320 Medicago truncatula HOM05D010195 ORTHO05D000088 2.2e-72 276.2 333 43.2
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 4.4e-65 251.9 318 41.8
Lj3g0008727 Lotus japonicus HOM05D010195 ORTHO05D000088 1.4e-39 167.2 336 31.5
Medtr3g088515 Medicago truncatula HOM05D010195 ORTHO05D000088 1.2e-38 164.1 110 68.2
TPR.G34772 Trifolium pratense HOM05D010195 ORTHO05D000088 1.8e-37 160.2 109 67.0
Glyma.12G048500 Glycine max HOM05D010195 ORTHO05D000088 1.3e-35 154.1 311 30.9
Phvul.011G050500 Phaseolus vulgaris HOM05D010195 ORTHO05D000088 1.4e-34 150.6 355 28.7
Glyma.11G125200 Glycine max HOM05D010195 ORTHO05D000088 1.8e-34 150.2 340 30.6
VMungo1127G0073 Vigna mungo HOM05D000395 ORTHO05D000088 7.6e-33 144.8 347 28.5
Lj3g0014714 Lotus japonicus HOM05D010195 ORTHO05D000088 1.0e-32 144.4 456 24.8
Lj3g0010423 Lotus japonicus HOM05D010195 ORTHO05D000088 4.2e-31 139.0 410 25.4
Glyma.14G055700 Glycine max HOM05D010195 ORTHO05D000088 9.6e-28 127.9 308 29.2
Phvul.008G220000 Phaseolus vulgaris HOM05D010195 ORTHO05D000088 8.2e-27 124.8 329 27.4
TPR.G11294 Trifolium pratense HOM05D010195 ORTHO05D000088 6.9e-26 121.7 89 65.2
Lj2g0020994 Lotus japonicus HOM05D010195 ORTHO05D000088 1.3e-24 117.5 107 51.4
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 9.7e-20 101.3 220 28.6
Eucgr.I01213 Eucalyptus grandis HOM05D008110 ORTHO05D000088 8.2e-19 98.2 275 26.2
Glyma.12G049900 Glycine max HOM05D010195 ORTHO05D000088 1.4e-18 97.4 131 37.4
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 7.7e-17 91.7 301 25.2
TWI31G0648 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.8e-13 80.5 291 23.0
VMungo0647G1636 Vigna mungo HOM05D000033 ORTHO05D002478 3.9e-13 79.3 151 31.8
TWI75G0037 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 2.6e-12 76.6 95 42.1
PGR102G2553 Punica granatum HOM05D000823 ORTHO05D000088 4.4e-12 75.9 260 26.9
Ah.06g189670 Amaranthus hybridus HOM05D000823 ORTHO05D000088 5.7e-12 75.5 235 23.4
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 9.7e-12 74.7 278 25.2
Lalb_Chr01g0003021 Lupinus albus HOM05D010195 ORTHO05D000088 9.7e-12 74.7 106 39.6
Gohir.D09G086300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.7e-11 73.9 268 26.1
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 1.7e-11 73.9 254 24.4
TWI31G0651 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 3.7e-11 72.8 108 38.0
Ciclev10028843m.g Citrus clementina HOM05D000823 ORTHO05D000088 4.8e-11 72.4 310 22.6
Gorai.006G102500 Gossypium raimondii HOM05D000823 ORTHO05D000088 8.2e-11 71.6 270 25.2
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 8.2e-11 71.6 112 35.7
VMungo1215G3243 Vigna mungo HOM05D010195 ORTHO05D000088 1.4e-10 70.9 85 43.5
Glyma.11G124000 Glycine max HOM05D010195 ORTHO05D000088 1.8e-10 70.5 64 42.2
Thhalv10000999m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 3.1e-10 69.7 255 22.4
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 3.1e-10 69.7 109 35.8
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.1e-10 69.3 99 36.4
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 9.1e-10 68.2 109 36.7
CANSAT80G0874 Cannabis sativa HOM05D000823 ORTHO05D000088 1.2e-09 67.8 260 25.0
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.5e-09 67.4 110 35.5
Aa31LG10G8500 Aethionema arabicum HOM05D006628 ORTHO05D000088 2.0e-09 67.0 235 25.1
Atru.chr2.2906 Acer truncatum HOM05D000823 ORTHO05D000088 2.6e-09 66.6 108 35.2
RcHm_v2.0_Chr6g0259241 Rosa chinensis HOM05D000823 ORTHO05D000088 3.4e-09 66.2 241 25.3
PSO170G3350 Papaver somniferum HOM05D000823 ORTHO05D000088 5.9e-09 65.5 113 32.7
C08p28520 Brassica napus HOM05D006628 ORTHO05D000088 7.7e-09 65.1 237 22.8
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 7.7e-09 65.1 91 36.3
Atru.chr5.2872 Acer truncatum HOM05D000823 ORTHO05D000088 1.0e-08 64.7 112 33.9
Duzib248G0315 Durio zibethinus HOM05D008110 ORTHO05D000088 1.0e-08 64.7 102 34.3
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.3e-08 64.3 99 35.4
arahy.Tifrunner.gnm1.ann1.4VG87B Arachis hypogaea HOM05D000823 ORTHO05D000088 1.7e-08 63.9 111 33.3
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.7e-08 63.9 110 31.8
Glyma.03G246400 Glycine max HOM05D000823 ORTHO05D000088 3.8e-08 62.8 105 34.3
Phvul.006G100700 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 5.0e-08 62.4 91 36.3
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 6.5e-08 62.0 85 41.2
CiPaw.02G012800 Carya illinoinensis HOM05D000823 ORTHO05D000088 8.5e-08 61.6 92 35.9
QL06p043952 Quercus lobata HOM05D000395 ORTHO05D000088 8.5e-08 61.6 110 29.1
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 8.5e-08 61.6 110 33.6
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 8.5e-08 61.6 91 34.1
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 1.1e-07 61.2 110 30.9
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.1e-07 61.2 85 38.8
RcHm_v2.0_Chr6g0259881 Rosa chinensis HOM05D000823 ORTHO05D000088 1.1e-07 61.2 129 28.7
SGA_v2.0_scaffold54G19506 Striga asiatica HOM05D008110 ORTHO05D000088 1.1e-07 61.2 92 35.9
PSO017G3561 Papaver somniferum HOM05D000823 ORTHO05D000088 1.4e-07 60.8 113 31.0
PSO170G0660 Papaver somniferum HOM05D000823 ORTHO05D000088 1.4e-07 60.8 115 29.6
Thecc.02G027900 Theobroma cacao HOM05D008110 ORTHO05D000088 1.4e-07 60.8 103 33.0
Atru.chr9.727 Acer truncatum HOM05D008110 ORTHO05D000088 2.5e-07 60.1 85 37.6
Migut.J01193 Erythranthe guttata HOM05D008110 ORTHO05D000088 2.5e-07 60.1 99 33.3
PSO170G1617 Papaver somniferum HOM05D000823 ORTHO05D000088 2.5e-07 60.1 115 28.7
Sopen01g051140 Solanum pennellii HOM05D008110 ORTHO05D000088 2.5e-07 60.1 110 30.9
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 3.2e-07 59.7 101 31.7
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 4.2e-07 59.3 248 25.8
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 5.5e-07 58.9 86 36.0
CAN.G192.14 Capsicum annuum HOM05D008110 ORTHO05D000088 7.2e-07 58.5 71 38.0
Cc11_g01500 Coffea canephora HOM05D008110 ORTHO05D000088 7.2e-07 58.5 91 33.0
Rhsim02G0167600 Rhododendron simsii HOM05D000395 ORTHO05D000088 7.2e-07 58.5 88 38.6
VMungo0540G0559 Vigna mungo HOM05D000823 ORTHO05D000088 9.4e-07 58.2 106 32.1
EL10Ac9g21795 Beta vulgaris HOM05D000823 ORTHO05D000088 1.2e-06 57.8 94 33.0
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 1.2e-06 57.8 93 34.4
FvH4_7g01780 Fragaria vesca HOM05D000823 ORTHO05D000088 1.2e-06 57.8 234 26.5
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.2e-06 57.8 92 37.0
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.2e-06 57.8 106 32.1
arahy.Tifrunner.gnm1.ann1.K3F6Y2 Arachis hypogaea HOM05D000823 ORTHO05D000088 1.6e-06 57.4 111 33.3
BolC9t54023H Brassica oleracea HOM05D000823 ORTHO05D000088 1.6e-06 57.4 95 37.9
CDE04G1885 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 1.6e-06 57.4 106 35.8
Migut.B01167 Erythranthe guttata HOM05D000823 ORTHO05D000088 2.1e-06 57.0 98 30.6
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.1e-06 57.0 218 23.9
FAN06G1437 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.1e-06 57.0 234 26.1
Lsat_1_v5_gn_4_9001 Lactuca sativa HOM05D009784 ORTHO05D000088 2.1e-06 57.0 146 32.9
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.1e-06 57.0 134 28.4
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 2.1e-06 57.0 106 32.1
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 2.7e-06 56.6 93 32.3
VMungo0235G0001 Vigna mungo HOM05D000823 ORTHO05D000088 2.7e-06 56.6 79 39.2
AUR62027225 Chenopodium quinoa HOM05D000823 ORTHO05D000088 3.6e-06 56.2 195 27.7
Haze_08007 Corylus avellana HOM05D000823 ORTHO05D000088 3.6e-06 56.2 105 31.4
Haze_08013 Corylus avellana HOM05D000823 ORTHO05D000088 3.6e-06 56.2 105 31.4
MBI16_g26333_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 3.6e-06 56.2 97 32.0
AT3G53310 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 4.7e-06 55.8 102 29.4
BcaC04g23179 Brassica carinata HOM05D000823 ORTHO05D000088 6.1e-06 55.5 96 37.5
A09p09600 Brassica napus HOM05D000823 ORTHO05D000088 6.1e-06 55.5 96 37.5
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 6.1e-06 55.5 99 36.4
Thhalv10004496m.g Eutrema salsugineum HOM05D000823 ORTHO05D000088 6.1e-06 55.5 93 35.5
PSO421G0015 Papaver somniferum HOM05D000823 ORTHO05D000088 6.1e-06 55.5 92 30.4
Eucgr.A01956 Eucalyptus grandis HOM05D008110 ORTHO05D000088 7.9e-06 55.1 71 35.2


User provided reference genes

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