Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11723_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 2.8e-86 322.0 173 100.0
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 5.0e-19 98.6 108 50.0
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 3.2e-18 95.9 105 48.6
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 3.2e-18 95.9 105 48.6
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 1.2e-17 94.0 123 42.3
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 1.2e-17 94.0 119 42.9
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 1.6e-17 93.6 122 41.8
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 2.7e-17 92.8 105 48.6
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 6.1e-17 91.7 107 45.8
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 6.1e-17 91.7 106 47.2
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 6.1e-17 91.7 166 35.5
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 6.1e-17 91.7 129 42.6
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 1.0e-16 90.9 107 45.8
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 1.4e-16 90.5 100 49.0
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 1.4e-16 90.5 107 45.8
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.4e-16 90.5 107 45.8
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.4e-16 90.5 107 45.8
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.4e-16 90.5 98 46.9
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 1.8e-16 90.1 116 42.2
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 1.8e-16 90.1 108 46.3
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 2.3e-16 89.7 108 42.6
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 2.3e-16 89.7 155 36.8
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 2.3e-16 89.7 161 36.6
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 3.0e-16 89.4 135 40.7
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 3.0e-16 89.4 134 41.8
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 3.0e-16 89.4 137 42.3
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 4.0e-16 89.0 122 41.0
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 5.2e-16 88.6 92 47.8
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 5.2e-16 88.6 63 60.3
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 5.2e-16 88.6 105 45.7
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 5.2e-16 88.6 143 39.9
BcaC03g14536 Brassica carinata HOM05D001177 ORTHO05D007091 6.8e-16 88.2 57 64.9
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 6.8e-16 88.2 132 40.9
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 6.8e-16 88.2 132 40.9
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 6.8e-16 88.2 127 40.9
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 6.8e-16 88.2 105 44.8
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 6.8e-16 88.2 91 48.4
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 8.8e-16 87.8 132 41.7
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 1.2e-15 87.4 127 42.5
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.2e-15 87.4 118 42.4
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 1.5e-15 87.0 141 38.3
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 1.5e-15 87.0 106 46.2
Aa31LG2G5370 Aethionema arabicum HOM05D001177 ORTHO05D001507 2.0e-15 86.7 116 40.5
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 2.0e-15 86.7 89 49.4
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 2.0e-15 86.7 92 46.7
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 2.0e-15 86.7 92 46.7
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 2.6e-15 86.3 135 39.3
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 2.6e-15 86.3 107 44.9
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 2.6e-15 86.3 164 37.2
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.6e-15 86.3 108 44.4
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 3.4e-15 85.9 107 42.1
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 4.4e-15 85.5 91 48.4
Cfa007285 Carpinus fangiana HOM05D001177 ORTHO05D007091 4.4e-15 85.5 105 42.9
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 4.4e-15 85.5 125 41.6
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 4.4e-15 85.5 92 47.8
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 4.4e-15 85.5 106 46.2
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 4.4e-15 85.5 89 49.4
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 5.7e-15 85.1 91 48.4
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 7.5e-15 84.7 91 46.2
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 7.5e-15 84.7 91 47.3
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 9.8e-15 84.3 134 39.6
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 9.8e-15 84.3 113 42.5
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 9.8e-15 84.3 92 46.7
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 9.8e-15 84.3 124 39.5
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 1.3e-14 84.0 115 39.1
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 1.3e-14 84.0 115 42.6
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 1.7e-14 83.6 93 44.1
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.7e-14 83.6 91 47.3
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 1.7e-14 83.6 91 47.3
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 1.7e-14 83.6 144 38.9
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 1.7e-14 83.6 91 44.0
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 2.2e-14 83.2 91 48.4
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 2.2e-14 83.2 94 50.0
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 2.2e-14 83.2 114 42.1
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 2.2e-14 83.2 114 42.1
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.8e-14 82.8 112 41.1
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 2.8e-14 82.8 110 41.8
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 2.8e-14 82.8 102 43.1
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 3.7e-14 82.4 112 42.0
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 4.8e-14 82.0 109 45.9
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 4.8e-14 82.0 84 47.6
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 4.8e-14 82.0 85 48.2
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 4.8e-14 82.0 95 47.4
Zm00001eb111820 Zea mays HOM05D001177 ORTHO05D007091 6.3e-14 81.6 82 50.0
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 8.3e-14 81.3 116 38.8
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 8.3e-14 81.3 94 44.7
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 8.3e-14 81.3 96 45.8
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 8.3e-14 81.3 95 44.2
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 8.3e-14 81.3 104 42.3
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 1.4e-13 80.5 124 37.1
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 1.4e-13 80.5 117 41.9
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 1.8e-13 80.1 104 41.3
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.8e-13 80.1 97 48.5
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 2.4e-13 79.7 96 41.7
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 3.1e-13 79.3 91 46.2
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 3.1e-13 79.3 91 48.4
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 4.1e-13 79.0 106 43.4
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 4.1e-13 79.0 138 39.1
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 4.1e-13 79.0 82 46.3
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 5.4e-13 78.6 99 41.4
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 7.0e-13 78.2 92 42.4
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 9.1e-13 77.8 99 41.4
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 9.1e-13 77.8 109 41.3
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 9.1e-13 77.8 98 40.8
Medtr7g035455 Medicago truncatula HOM05D001177 ORTHO05D007091 1.2e-12 77.4 99 41.4
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 1.6e-12 77.0 138 35.5
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 1.6e-12 77.0 115 39.1
A02p35380 Brassica napus HOM05D001177 ORTHO05D007091 2.7e-12 76.3 125 37.6
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 4.5e-12 75.5 91 46.2
Mapoly0006s0009 Marchantia polymorpha HOM05D001177 ORTHO05D007091 5.9e-12 75.1 95 40.0
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 7.7e-12 74.7 104 41.3
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 3.8e-11 72.4 89 46.1
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 3.8e-11 72.4 84 45.2
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 5.0e-11 72.0 82 46.3
Ca_03262_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 6.5e-11 71.6 83 47.0
Thecc.04G025000 Theobroma cacao HOM05D001177 ORTHO05D007091 1.1e-10 70.9 92 41.3
ECA232G2835 Erigeron canadensis HOM05D003414 ORTHO05D003913 5.5e-10 68.6 100 39.0
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 7.2e-10 68.2 125 32.8
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 1.6e-09 67.0 119 34.5
Gohir.D09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 4.7e-09 65.5 80 45.0
Medtr1g093975 Medicago truncatula HOM05D001177 ORTHO05D007091 6.1e-09 65.1 98 34.7
Medtr1g094005 Medicago truncatula HOM05D001177 ORTHO05D007091 6.1e-09 65.1 98 34.7
Peaxi162Scf00080g01722 Petunia axillaris HOM05D001177 ORTHO05D007091 6.1e-09 65.1 122 33.6
Pp3c9_11850 Physcomitrium patens HOM05D001177 ORTHO05D007091 1.8e-08 63.5 106 34.0
Pp3c9_11853 Physcomitrium patens HOM05D001177 ORTHO05D007091 1.8e-08 63.5 106 34.0
TPR.G3617 Trifolium pratense HOM05D001177 ORTHO05D007091 6.8e-08 61.6 107 35.5
CBR_g51805 Chara braunii HOM05D001177 ORTHO05D007091 8.8e-08 61.2 95 35.8
Nitab4.5_0005587g0090 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.2e-07 60.8 69 44.9
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 2.0e-07 60.1 159 32.1
Dinv33388 Davidia involucrata HOM05D001177 ORTHO05D007091 9.8e-07 57.8 45 60.0
Manes.01G049405 Manihot esculenta HOM05D001177 ORTHO05D007091 4.9e-06 55.5 43 60.5
Manes.S095224 Manihot esculenta HOM05D001177 ORTHO05D007091 4.9e-06 55.5 43 60.5


User provided reference genes

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