Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.5e-132 474.9 235 100.0
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.6e-108 394.8 241 84.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.2e-100 370.2 240 81.2
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 6.6e-99 364.4 239 79.9
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.6e-97 358.6 244 79.1
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.6e-92 341.7 187 87.2
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 5.1e-91 338.2 245 73.9
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.5e-90 336.7 239 74.1
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.3e-89 333.6 236 71.6
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.3e-89 333.6 236 71.6
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.3e-89 333.6 236 71.6
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 6.2e-89 331.3 246 71.5
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 3.1e-88 328.9 247 70.0
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 3.1e-88 328.9 242 72.7
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.2e-87 327.0 239 72.0
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.6e-87 325.9 248 69.4
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 3.4e-87 325.5 265 68.7
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 5.8e-87 324.7 235 70.2
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 7.6e-87 324.3 241 71.8
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 6.4e-86 321.2 249 67.5
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.1e-85 320.5 241 70.1
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 4.2e-85 318.5 245 68.6
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 5.5e-85 318.2 246 67.9
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 7.1e-85 317.8 242 68.2
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 9.3e-85 317.4 240 71.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 9.3e-85 317.4 236 70.8
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.2e-84 317.0 241 69.3
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.6e-84 316.6 241 72.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.7e-84 315.8 240 71.2
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.7e-84 315.8 240 71.2
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.5e-84 315.5 241 69.3
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 1.8e-83 313.2 242 70.2
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 2.3e-83 312.8 238 71.4
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.3e-83 312.8 238 71.4
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.3e-83 312.8 242 70.7
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 3.9e-83 312.0 246 70.3
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 3.9e-83 312.0 246 70.3
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 5.1e-83 311.6 244 66.8
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 6.7e-83 311.2 245 69.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 6.7e-83 311.2 236 69.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 8.7e-83 310.8 243 68.3
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.9e-82 309.7 240 69.2
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.3e-82 308.5 239 69.5
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 3.7e-81 305.4 248 66.1
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.7e-81 305.4 244 64.3
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 3.7e-81 305.4 242 67.8
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 4.8e-81 305.1 244 67.2
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 4.8e-81 305.1 234 68.8
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 6.2e-81 304.7 228 69.7
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.1e-80 303.9 246 67.9
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.4e-80 303.5 243 67.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.8e-80 303.1 232 70.7
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.8e-80 303.1 228 70.6
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 3.1e-80 302.4 237 64.1
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 4.0e-80 302.0 238 64.7
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 9.0e-80 300.8 245 66.5
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.2e-79 300.4 237 64.6
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 5.8e-79 298.1 241 67.6
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 5.8e-79 298.1 231 67.5
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.7e-78 296.6 250 64.8
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.9e-77 293.1 270 59.6
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 3.2e-77 292.4 291 57.0
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.7e-76 289.3 246 61.4
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.7e-76 289.3 224 65.6
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 3.5e-76 288.9 246 66.3
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 6.0e-76 288.1 245 66.1
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.3e-75 287.0 207 68.1
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 2.3e-75 286.2 265 57.4
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 2.3e-75 286.2 207 68.6
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 3.9e-75 285.4 206 67.5
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.1e-74 283.9 245 61.6
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 1.9e-74 283.1 160 83.8
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 2.5e-74 282.7 220 64.1
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 3.3e-74 282.3 232 63.4
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 3.3e-74 282.3 236 63.1
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 4.3e-74 282.0 246 61.8
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 4.3e-74 282.0 220 64.1
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 5.7e-74 281.6 238 62.2
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 7.4e-74 281.2 238 62.2
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 7.4e-74 281.2 238 62.2
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 9.6e-74 280.8 226 65.5
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 2.8e-73 279.3 240 63.3
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 4.8e-73 278.5 199 67.3
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 6.3e-73 278.1 228 62.7
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.4e-72 276.2 243 58.8
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 3.1e-72 275.8 239 61.9
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 4.1e-72 275.4 239 61.9
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 4.1e-72 275.4 206 67.0
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 5.3e-72 275.0 163 81.6
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.2e-71 273.9 248 59.3
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.2e-71 273.9 248 59.3
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.2e-71 273.9 225 63.1
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 1.2e-71 273.9 246 59.8
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 5.0e-70 268.5 183 76.0
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 8.4e-70 267.7 284 54.2
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 2.8e-65 252.7 211 62.6
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 4.1e-64 248.8 149 81.2
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 9.0e-64 247.7 237 57.0
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 2.6e-63 246.1 167 70.7
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.4e-61 240.4 236 56.8
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 8.2e-57 224.6 243 53.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 2.4e-56 223.0 189 57.1
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 2.0e-55 219.9 110 93.6
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 3.8e-54 215.7 187 58.3
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 3.8e-54 215.7 133 75.9
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.1e-53 214.2 241 50.6
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 2.0e-50 203.4 190 62.1
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 2.8e-49 199.5 130 72.3
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 9.4e-45 184.5 191 55.0
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 4.0e-43 179.1 152 61.2
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 8.5e-38 161.4 90 82.2
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.3e-33 147.5 153 57.5
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.0e-30 137.9 106 62.3
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.5e-29 133.3 94 67.0
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.2e-29 132.9 69 92.8
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 3.4e-26 122.9 151 45.0
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 3.1e-24 116.3 114 57.9
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 3.8e-22 109.4 54 94.4
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-19 100.9 93 50.5
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 6.8e-19 98.6 49 89.8
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.4e-16 90.1 68 66.2
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 4.7e-12 75.9 38 81.6
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 5.2e-11 72.4 38 89.5
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 9.2e-08 61.6 31 87.1


User provided reference genes

Program Settings