Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 1.5e-130 469.5 233 100.0
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 1.7e-107 392.9 243 85.2
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 5.6e-106 387.9 240 82.5
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 3.6e-105 385.2 241 83.0
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 1.2e-95 353.6 244 77.9
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.9e-93 346.3 236 78.4
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 5.4e-93 344.7 244 75.8
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 7.0e-93 344.4 233 78.1
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 7.0e-93 344.4 233 78.1
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 7.8e-92 340.9 232 77.6
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 5.6e-90 334.7 229 78.6
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.6e-81 306.6 222 72.5
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 8.1e-81 304.3 194 75.3
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 8.1e-81 304.3 188 79.3
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 1.4e-80 303.5 220 71.8
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 1.8e-80 303.1 199 76.9
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 2.3e-80 302.8 221 70.1
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 3.1e-80 302.4 224 71.4
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 4.0e-80 302.0 219 70.8
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 4.0e-80 302.0 228 68.4
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 4.0e-80 302.0 180 81.7
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 4.0e-80 302.0 180 81.7
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 5.2e-80 301.6 233 66.5
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 6.8e-80 301.2 223 71.7
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 8.9e-80 300.8 180 80.6
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 1.2e-79 300.4 180 81.1
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 1.2e-79 300.4 232 67.2
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 2.0e-79 299.7 190 77.9
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 2.0e-79 299.7 200 75.5
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 2.0e-79 299.7 194 74.2
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 2.6e-79 299.3 185 78.4
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 2.6e-79 299.3 229 68.6
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 4.4e-79 298.5 217 71.4
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 7.6e-79 297.7 229 67.7
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 9.9e-79 297.4 202 72.8
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 9.9e-79 297.4 217 72.8
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 9.9e-79 297.4 223 69.5
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.3e-78 297.0 200 74.5
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 1.7e-78 296.6 228 67.1
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 1.7e-78 296.6 189 76.2
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 1.7e-78 296.6 234 65.8
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 2.2e-78 296.2 223 70.0
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 3.8e-78 295.4 175 81.1
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 3.8e-78 295.4 189 78.3
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.8e-78 295.4 219 69.4
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 3.8e-78 295.4 178 80.9
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 4.9e-78 295.0 227 64.8
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 4.9e-78 295.0 229 69.4
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 4.9e-78 295.0 180 80.6
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 6.4e-78 294.7 235 65.1
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 6.4e-78 294.7 228 69.3
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 6.4e-78 294.7 219 69.4
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 8.4e-78 294.3 225 69.3
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 1.1e-77 293.9 186 78.0
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 1.4e-77 293.5 178 78.7
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 1.9e-77 293.1 186 77.4
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 1.9e-77 293.1 215 69.8
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 2.4e-77 292.7 205 73.2
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 3.2e-77 292.4 222 68.5
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 4.1e-77 292.0 227 69.2
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 4.1e-77 292.0 223 67.7
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 5.4e-77 291.6 228 66.2
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 5.4e-77 291.6 229 66.4
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 7.1e-77 291.2 221 66.1
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 9.2e-77 290.8 235 67.7
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 9.2e-77 290.8 233 67.4
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 1.2e-76 290.4 218 72.0
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.6e-76 290.0 219 68.5
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 1.6e-76 290.0 206 71.8
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 1.6e-76 290.0 235 63.4
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 2.1e-76 289.7 203 71.9
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 6.0e-76 288.1 234 65.8
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 6.0e-76 288.1 180 76.7
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 7.8e-76 287.7 209 69.4
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 5.1e-75 285.0 218 67.4
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 8.6e-75 284.3 157 84.7
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.9e-74 283.1 225 66.2
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 9.6e-74 280.8 174 79.3
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.2e-73 280.4 149 88.6
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 2.8e-73 279.3 256 60.9
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.6e-73 278.9 175 76.6
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 3.6e-73 278.9 224 66.1
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.8e-72 276.6 191 73.3
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 8.9e-72 274.2 157 82.8
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.5e-71 273.5 166 80.1
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 2.0e-71 273.1 226 63.7
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 4.2e-69 265.4 172 72.7
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 5.4e-69 265.0 223 61.9
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.2e-68 263.8 181 71.8
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 3.0e-67 259.2 173 71.1
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 1.1e-66 257.3 316 50.3
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 3.6e-65 252.3 167 73.1
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 5.8e-63 245.0 147 76.2
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 9.9e-63 244.2 238 56.3
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 2.9e-62 242.7 191 67.0
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 4.6e-60 235.3 157 72.0
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 1.1e-58 230.7 175 66.3
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.2e-55 220.7 122 82.8
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.5e-55 220.3 172 61.0
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 4.9e-54 215.3 174 59.8
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 3.0e-51 206.1 122 75.4
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 3.7e-49 199.1 211 51.2
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 5.3e-48 195.3 153 61.4
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 2.3e-43 179.9 94 88.3
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.4e-40 170.6 115 72.2
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.4e-40 170.6 115 72.2
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.8e-40 170.2 118 66.9
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 1.0e-35 154.5 197 50.8
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 1.1e-32 144.4 115 72.2
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.7e-26 122.1 65 84.6
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 3.2e-21 106.3 73 75.3
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 1.0e-19 101.3 165 35.2
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 6.3e-17 92.0 144 34.7
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.6e-15 87.4 56 78.6
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 1.6e-15 87.4 48 81.2
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 3.8e-14 82.8 129 36.4
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.0e-11 73.2 105 47.6
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 2.0e-10 70.5 83 51.8
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 9.1e-08 61.6 123 28.5
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 1.6e-07 60.8 209 26.3


User provided reference genes

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