Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 5.5e-66 254.2 133 100.0
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 2.4e-53 212.2 133 81.2
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 3.4e-52 208.4 133 79.7
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 1.4e-50 203.0 129 80.6
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 1.8e-45 186.0 129 72.9
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 9.1e-45 183.7 133 69.2
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 2.0e-44 182.6 128 71.9
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 2.6e-44 182.2 133 69.9
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 4.2e-42 174.9 129 69.8
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 2.0e-39 166.0 128 67.2
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 7.4e-39 164.1 129 62.0
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.2e-36 156.8 129 63.6
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.2e-36 156.8 129 63.6
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.2e-36 156.8 129 63.6
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.5e-36 154.8 126 62.7
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 5.9e-36 154.5 124 63.7
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 1.0e-35 153.7 128 61.7
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.3e-35 153.3 128 60.9
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 1.3e-35 153.3 129 62.0
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 2.2e-35 152.5 129 58.1
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 5.0e-35 151.4 129 60.5
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.5e-34 149.8 125 63.2
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 5.5e-34 147.9 114 67.5
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.2e-33 146.7 127 59.1
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.1e-33 146.0 128 59.4
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.1e-33 146.0 140 55.7
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 4.7e-33 144.8 141 56.0
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.0e-32 143.7 128 58.6
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.4e-32 143.3 130 60.0
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.8e-32 142.9 124 59.7
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.8e-32 142.9 128 60.9
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.3e-32 142.5 123 60.2
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 3.0e-32 142.1 125 57.6
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 5.2e-32 141.4 127 58.3
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 4.4e-31 138.3 128 55.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 7.5e-31 137.5 127 55.1
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 7.5e-31 137.5 128 56.2
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 7.5e-31 137.5 149 49.7
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 9.7e-31 137.1 127 55.9
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.3e-30 136.7 127 55.1
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 1.3e-30 136.7 124 56.5
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 1.3e-30 136.7 125 55.2
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.7e-30 136.3 127 55.1
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 2.2e-30 136.0 129 55.8
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.2e-30 136.0 129 55.0
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 2.8e-30 135.6 125 56.0
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 4.8e-30 134.8 121 59.5
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.8e-30 134.8 129 52.7
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 4.8e-30 134.8 137 51.8
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 1.1e-29 133.7 128 53.1
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 1.1e-29 133.7 145 51.7
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.8e-29 132.9 130 55.4
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.8e-29 132.9 128 53.1
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 2.4e-29 132.5 128 53.9
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.1e-29 131.7 128 53.1
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 5.3e-29 131.3 127 53.5
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 5.3e-29 131.3 133 50.4
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 9.1e-29 130.6 124 53.2
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.2e-28 130.2 120 55.8
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.6e-28 129.8 129 52.7
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.6e-28 129.8 130 52.3
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.6e-28 129.8 124 53.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 2.0e-28 129.4 134 52.2
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 123 55.3
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 123 55.3
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 3.5e-28 128.6 124 55.6
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.5e-28 128.6 162 47.5
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 5.9e-28 127.9 122 54.1
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 7.7e-28 127.5 79 81.0
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.0e-27 127.1 103 62.1
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.7e-27 126.3 126 54.0
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 5.0e-27 124.8 123 52.8
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 5.0e-27 124.8 127 52.0
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 5.0e-27 124.8 127 52.0
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 5.0e-27 124.8 128 52.3
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 6.5e-27 124.4 126 53.2
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 8.5e-27 124.0 127 52.0
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 8.5e-27 124.0 127 52.8
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 8.5e-27 124.0 126 52.4
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 1.9e-26 122.9 129 50.4
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 2.5e-26 122.5 127 51.2
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 2.5e-26 122.5 127 50.4
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 5.5e-26 121.3 127 50.4
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 5.5e-26 121.3 122 52.5
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 5.5e-26 121.3 128 47.7
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 5.5e-26 121.3 128 50.8
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 9.4e-26 120.6 129 51.2
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.2e-25 120.2 127 52.0
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.6e-25 119.8 127 49.6
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 1.6e-25 119.8 127 50.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 2.7e-25 119.0 128 50.0
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.7e-25 119.0 80 71.2
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.7e-25 119.0 123 51.2
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 2.7e-25 119.0 127 49.6
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 4.7e-25 118.2 124 51.6
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 6.1e-25 117.9 115 51.3
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 6.8e-24 114.4 118 50.8
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.5e-23 113.2 167 43.1
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 9.8e-23 110.5 78 66.7
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 8.3e-22 107.5 127 46.5
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.8e-21 106.3 99 54.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 4.1e-21 105.1 81 58.0
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.0e-20 102.8 128 47.7
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.0e-20 102.8 127 47.2
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 2.7e-20 102.4 79 62.0
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.2e-15 87.0 99 43.4
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 9.8e-15 84.0 117 41.9
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.3e-14 83.6 126 42.1
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 2.2e-14 82.8 117 41.9
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 9.2e-13 77.4 86 48.8
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 5.9e-12 74.7 94 40.4
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 1.5e-10 70.1 62 56.5
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 7.3e-10 67.8 98 42.9
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 7.3e-10 67.8 98 42.9
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 4.0e-08 62.0 92 42.4
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 3.4e-07 58.9 92 39.1
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 4.4e-07 58.5 92 41.3
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 4.4e-07 58.5 53 56.6
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 7.5e-07 57.8 47 63.8
arahy.Tifrunner.gnm1.ann1.Q46SAL Arachis hypogaea HOM05D006467 ORTHO05D008012 1.3e-06 57.0 42 64.3
arahy.Tifrunner.gnm1.ann1.LA4XPU Arachis hypogaea HOM05D006467 ORTHO05D008012 2.2e-06 56.2 33 78.8
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 2.9e-06 55.8 86 39.5
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 2.9e-06 55.8 37 67.6


User provided reference genes

Program Settings