Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11442_v3 Cicer arietinum L. HOM05D004973 ORTHO05D006119 4.5e-95 351.3 184 100.0
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 8.7e-38 161.0 242 50.0
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 1.9e-37 159.8 298 42.6
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 2.3e-30 136.3 284 40.8
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 9.0e-27 124.4 287 39.7
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 1.5e-26 123.6 295 37.6
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 5.9e-26 121.7 288 39.9
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 1.8e-22 110.2 319 35.1
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 1.4e-19 100.5 75 73.3
Glyma.13G135200 Glycine max HOM05D004973 ORTHO05D006119 9.1e-19 97.8 114 58.8
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 1.2e-15 87.4 69 72.5
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 5.1e-14 82.0 261 34.5
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 9.7e-13 77.8 70 62.9
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 6.3e-12 75.1 262 31.7
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 1.4e-11 73.9 278 31.3
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 1.2e-10 70.9 244 30.7
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 1.2e-10 70.9 65 61.5
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 4.5e-10 68.9 254 29.9
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 1.3e-09 67.4 240 33.8
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 1.7e-09 67.0 276 30.1
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 8.5e-09 64.7 254 29.9
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 1.1e-08 64.3 218 34.9
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 2.5e-08 63.2 251 31.1
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 5.5e-08 62.0 245 29.8
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 7.2e-08 61.6 270 29.3
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.2e-07 60.8 272 29.8
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 2.7e-07 59.7 268 30.2
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.7e-07 59.7 237 27.8
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 4.7e-07 58.9 224 30.8
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 4.7e-07 58.9 276 27.5
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 8.0e-07 58.2 114 41.2
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.0e-06 57.8 272 29.4
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 1.8e-06 57.0 181 29.8
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.8e-06 57.0 270 28.9
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 2.3e-06 56.6 44 68.2
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 3.0e-06 56.2 244 30.3
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 4.0e-06 55.8 239 27.6
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 4.0e-06 55.8 52 63.5
PGSC0003DMG400002023 Solanum tuberosum HOM05D004973 ORTHO05D006119 4.0e-06 55.8 79 45.6


User provided reference genes

Program Settings