Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.0e-129 466.8 258 100.0
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 5.4e-94 348.2 222 78.8
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 1.1e-91 340.5 217 80.6
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.6e-90 336.7 234 77.8
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 2.8e-90 335.9 221 77.8
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.0e-88 329.7 224 73.7
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 9.9e-88 327.4 222 73.0
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 3.6e-82 308.9 223 72.6
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 6.4e-79 298.1 217 68.2
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 2.3e-76 289.7 248 61.7
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 1.5e-75 287.0 220 70.0
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 7.3e-75 284.6 217 64.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.6e-74 283.5 220 65.5
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 2.8e-74 282.7 217 64.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 2.8e-74 282.7 216 66.7
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 3.6e-74 282.3 219 66.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 3.6e-74 282.3 217 65.9
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 6.2e-74 281.6 205 71.2
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 8.1e-74 281.2 220 65.5
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 1.1e-73 280.8 216 64.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 2.4e-73 279.6 217 65.9
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.3e-73 278.5 216 64.4
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 9.0e-73 277.7 213 65.3
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.5e-72 276.9 214 65.0
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 2.0e-72 276.6 213 65.3
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.6e-72 276.2 213 65.3
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 3.4e-72 275.8 217 65.0
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 5.8e-72 275.0 218 62.4
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 7.6e-72 274.6 225 62.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.9e-71 272.7 224 62.5
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 6.4e-71 271.6 222 59.9
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 3.2e-70 269.2 217 61.3
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 1.2e-69 267.3 221 61.5
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.6e-69 266.9 219 65.3
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.6e-69 266.9 209 64.6
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 4.6e-69 265.4 203 61.6
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 4.6e-69 265.4 216 60.2
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 6.0e-69 265.0 217 59.9
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.7e-68 263.5 220 61.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.3e-68 263.1 206 65.0
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 5.1e-68 261.9 192 68.8
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.1e-67 260.8 217 60.4
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 1.1e-67 260.8 214 61.2
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.1e-67 260.8 232 57.3
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.5e-67 260.4 217 59.9
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.5e-67 260.4 195 66.7
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.9e-67 260.0 203 63.5
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 2.5e-67 259.6 214 61.7
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 3.3e-67 259.2 204 63.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.3e-67 258.8 217 59.9
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.3e-67 258.8 215 58.1
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 4.3e-67 258.8 215 58.1
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 5.6e-67 258.5 204 63.2
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 5.6e-67 258.5 206 63.6
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 7.3e-67 258.1 205 61.0
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 9.6e-67 257.7 215 58.1
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.6e-66 256.9 216 61.1
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.6e-66 256.9 213 59.2
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 3.6e-66 255.8 215 57.7
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 3.6e-66 255.8 215 57.7
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 3.6e-66 255.8 216 59.7
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 6.2e-66 255.0 213 58.7
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 8.1e-66 254.6 213 59.2
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.4e-65 253.8 216 58.8
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 2.4e-65 253.1 204 62.7
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 2.4e-65 253.1 206 60.2
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 5.3e-65 251.9 229 56.8
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 5.3e-65 251.9 207 59.9
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 2.6e-64 249.6 200 63.5
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 9.9e-64 247.7 204 59.8
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.2e-63 246.5 216 57.9
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 6.4e-63 245.0 243 54.7
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 6.4e-63 245.0 218 56.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.6e-61 240.4 202 59.4
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.1e-61 240.0 205 61.0
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 2.7e-61 239.6 203 57.6
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.6e-61 238.8 199 58.8
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 7.9e-61 238.0 205 61.0
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 5.1e-60 235.3 216 57.4
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 6.7e-60 235.0 206 57.3
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 8.7e-60 234.6 204 59.3
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.1e-59 234.2 177 65.5
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.1e-57 227.6 213 53.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 4.0e-57 225.7 201 56.2
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 2.0e-56 223.4 178 64.6
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.9e-55 219.5 176 61.4
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 4.9e-55 218.8 220 51.4
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.6e-53 212.2 163 64.4
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.3e-52 210.7 188 61.2
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 1.8e-52 210.3 178 61.8
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 5.1e-52 208.8 163 62.6
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.5e-51 207.2 153 66.7
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.8e-50 202.2 203 52.2
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 4.5e-48 195.7 177 57.6
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 4.5e-48 195.7 180 60.0
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.9e-46 190.3 233 46.4
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 3.5e-45 186.0 201 47.8
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 3.5e-45 186.0 174 52.9
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.3e-44 183.3 167 56.3
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.3e-43 179.1 214 46.7
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 7.2e-38 161.8 134 62.7
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.8e-36 157.1 208 39.4
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 3.9e-36 156.0 205 41.5
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 1.1e-35 154.5 92 79.3
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 2.5e-35 153.3 92 79.3
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 5.7e-35 152.1 235 44.3
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 9.7e-35 151.4 93 74.2
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 8.2e-34 148.3 123 62.6
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 2.4e-33 146.7 123 61.0
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 2.6e-32 143.3 197 40.6
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.7e-32 141.7 263 39.5
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 4.2e-30 136.0 123 57.7
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 9.4e-30 134.8 213 38.0
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.8e-28 130.6 170 39.4
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.6e-27 126.7 84 71.4
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 2.9e-23 113.2 99 59.6
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.8e-23 112.8 99 61.6
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.9e-22 110.5 120 49.2
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 4.2e-22 109.4 213 32.9
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.6e-19 100.1 142 45.8
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.7e-18 97.4 97 53.6
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.4e-17 94.4 59 72.9
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 3.1e-09 66.6 83 43.4
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 2.9e-07 60.1 51 54.9
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 5.0e-07 59.3 50 52.0


User provided reference genes

Program Settings