Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11387_v3 Cicer arietinum L. HOM05D006358 ORTHO05D008185 9.7e-161 570.1 285 100.0
Medtr1g116320 Medicago truncatula HOM05D006358 ORTHO05D008185 3.9e-138 495.0 269 91.1
TPR.G10386 Trifolium pratense HOM05D006358 ORTHO05D008185 1.3e-136 490.0 272 90.4
Psat6g240320 Pisum sativum HOM05D003840 ORTHO05D004565 4.8e-136 488.0 272 88.2
VMungo0720G2736 Vigna mungo HOM05D006358 ORTHO05D008185 7.0e-135 484.2 272 87.5
arahy.Tifrunner.gnm1.ann1.TN3NK4 Arachis hypogaea HOM05D006358 ORTHO05D008185 1.2e-134 483.4 266 86.5
Lj5g0002595 Lotus japonicus HOM05D006358 ORTHO05D008185 3.8e-133 478.4 272 87.1
Lalb_Chr02g0144221 Lupinus albus HOM05D006358 ORTHO05D008185 9.4e-132 473.8 266 85.0
Prupe.6G013900 Prunus persica HOM05D006358 ORTHO05D008185 2.0e-121 439.5 268 78.0
Cfa009639 Carpinus fangiana HOM05D006358 ORTHO05D008185 4.1e-119 431.8 268 76.5
CiPaw.14G129700 Carya illinoinensis HOM05D006358 ORTHO05D008185 1.2e-118 430.3 268 75.0
TAR633G2634 Trochodendron aralioides HOM05D006358 ORTHO05D008185 1.3e-117 426.8 268 76.1
QL01p009947 Quercus lobata HOM05D006358 ORTHO05D008185 1.1e-116 423.7 273 75.8
Manes.03G089800 Manihot esculenta HOM05D006358 ORTHO05D008185 1.5e-116 423.3 271 74.5
Thecc.09G216800 Theobroma cacao HOM05D006358 ORTHO05D008185 2.5e-116 422.5 272 75.0
Gorai.004G092800 Gossypium raimondii HOM05D006358 ORTHO05D008185 3.3e-116 422.2 266 75.9
MD11G1015800 Malus domestica HOM05D006358 ORTHO05D008185 1.2e-115 420.2 270 74.8
Actinidia01838 Actinidia chinensis HOM05D006358 ORTHO05D008185 1.6e-115 419.9 268 75.7
TWI34G0094 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 2.8e-115 419.1 267 77.9
Gohir.A08G078500 Gossypium hirsutum HOM05D006358 ORTHO05D008185 2.3e-114 416.0 266 75.2
CANSAT54G1685 Cannabis sativa HOM05D006358 ORTHO05D008185 3.0e-114 415.6 269 76.2
Duzib150G0556 Durio zibethinus HOM05D006358 ORTHO05D008185 4.0e-114 415.2 266 75.2
RcHm_v2.0_Chr5g0080731 Rosa chinensis HOM05D006358 ORTHO05D008185 8.9e-114 414.1 272 75.4
vmacro21759 Vaccinium macrocarpon HOM05D006358 ORTHO05D008185 1.2e-113 413.7 268 74.3
Sc09g0000330 Simmondsia chinensis HOM05D006358 ORTHO05D008185 2.6e-113 412.5 265 72.8
FvH4_3g44350 Fragaria vesca HOM05D006358 ORTHO05D008185 3.4e-113 412.1 272 74.3
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 3.4e-113 412.1 272 74.3
CsaV3_4G023700 Cucumis sativus L. HOM05D006358 ORTHO05D008185 5.7e-113 411.4 268 74.6
Potri.001G011700 Populus trichocarpa HOM05D006358 ORTHO05D008185 5.7e-113 411.4 271 73.4
PSO339G4609 Papaver somniferum HOM05D006358 ORTHO05D008185 7.5e-113 411.0 268 73.1
Sabra01G0008700 Salix brachista HOM05D006358 ORTHO05D008185 7.5e-113 411.0 280 72.1
Aqoxy1G00024 Aquilegia oxysepala HOM05D006358 ORTHO05D008185 9.8e-113 410.6 268 72.4
Hma1.2p1_0050F.1_g029070 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 2.8e-112 409.1 268 73.5
SGA_v2.0_scaffold1G00759 Striga asiatica HOM05D006358 ORTHO05D008185 3.7e-112 408.7 270 72.6
Eucgr.B02608 Eucalyptus grandis HOM05D006358 ORTHO05D008185 1.4e-111 406.8 283 71.4
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 1.4e-111 406.8 270 72.6
PSO384G4606 Papaver somniferum HOM05D006358 ORTHO05D008185 2.4e-111 406.0 268 71.6
Cc01_g03170 Coffea canephora HOM05D006358 ORTHO05D008185 3.1e-111 405.6 268 71.3
COL.COLO4_10429 Corchorus olitorius HOM05D006358 ORTHO05D008185 5.4e-111 404.8 268 72.8
Ciclev10015496m.g Citrus clementina HOM05D006358 ORTHO05D008185 7.0e-111 404.4 268 72.8
PGR119G1893 Punica granatum HOM05D006358 ORTHO05D008185 9.2e-111 404.1 268 73.5
ECA248G2469 Erigeron canadensis HOM05D006358 ORTHO05D008185 1.2e-110 403.7 269 72.1
ClCG02G023710 Citrullus lanatus HOM05D006358 ORTHO05D008185 2.0e-110 402.9 268 73.9
Glyma.20G244500 Glycine max HOM05D006358 ORTHO05D008185 2.0e-110 402.9 233 83.3
Peaxi162Scf00192g00019 Petunia axillaris HOM05D006358 ORTHO05D008185 2.7e-110 402.5 268 70.5
GSVIVG01025367001 Vitis vinifera HOM05D006358 ORTHO05D008185 2.7e-110 402.5 266 74.1
EL10Ac4g10334 Beta vulgaris HOM05D006358 ORTHO05D008185 3.5e-110 402.1 268 71.3
HanXRQChr11g0345451 Helianthus annuus HOM05D006358 ORTHO05D008185 4.5e-110 401.7 265 72.1
Oeu058541.2 Olea europaea HOM05D006358 ORTHO05D008185 1.7e-109 399.8 265 70.9
CAN.G140.8 Capsicum annuum HOM05D006358 ORTHO05D008185 5.0e-109 398.3 268 70.1
Solyc01g006330.4 Solanum lycopersicum HOM05D006358 ORTHO05D008185 1.5e-108 396.7 268 70.5
DCAR_024375 Daucus carota HOM05D006358 ORTHO05D008185 3.3e-108 395.6 266 70.7
PGSC0003DMG400032149 Solanum tuberosum HOM05D006358 ORTHO05D008185 3.3e-108 395.6 268 70.1
Sopen01g002330 Solanum pennellii HOM05D006358 ORTHO05D008185 4.3e-108 395.2 268 70.1
Migut.D00538 Erythranthe guttata HOM05D006358 ORTHO05D008185 2.1e-107 392.9 268 72.8
Glyma.10G294800 Glycine max HOM05D006358 ORTHO05D008185 1.0e-106 390.6 244 78.7
Nitab4.5_0003436g0040 Nicotiana tabacum HOM05D006358 ORTHO05D008185 1.8e-106 389.8 268 68.3
THA.LOC104810430 Tarenaya hassleriana HOM05D006358 ORTHO05D008185 3.0e-106 389.0 266 69.9
Cpa.g.sc1127.2 Carica papaya HOM05D006358 ORTHO05D008185 1.5e-105 386.7 245 76.3
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 5.8e-105 384.8 265 71.3
CARHR041130 Cardamine hirsuta HOM05D006358 ORTHO05D008185 7.5e-105 384.4 268 70.1
A06p02670 Brassica napus HOM05D006358 ORTHO05D008185 9.8e-105 384.0 267 70.4
BcaB07g33557 Brassica carinata HOM05D006358 ORTHO05D008185 1.7e-104 383.3 267 70.4
BraA06t23476Z Brassica rapa HOM05D006358 ORTHO05D008185 2.2e-104 382.9 267 69.7
Carub.0001s4002 Capsella rubella HOM05D006358 ORTHO05D008185 2.2e-104 382.9 266 69.2
Nitab4.5_0005041g0010 Nicotiana tabacum HOM05D006358 ORTHO05D008185 2.2e-104 382.9 285 64.9
Sp1g37840 Schrenkiella parvula HOM05D006358 ORTHO05D008185 8.3e-104 380.9 267 69.3
BcaC08g43281 Brassica carinata HOM05D006358 ORTHO05D008185 1.9e-103 379.8 267 69.7
C06p06310 Brassica napus HOM05D006358 ORTHO05D008185 1.9e-103 379.8 267 69.7
BolC6t35740H Brassica oleracea HOM05D006358 ORTHO05D008185 1.9e-103 379.8 267 69.7
Lj2A674T44 Lonicera japonica HOM05D006358 ORTHO05D008185 3.2e-103 379.0 244 75.0
AL1G58910 Arabidopsis lyrata HOM05D006358 ORTHO05D008185 5.4e-103 378.3 267 69.7
AT1G51110 Arabidopsis thaliana HOM05D006358 ORTHO05D008185 1.2e-102 377.1 267 69.3
MELO3C014648.2 Cucumis melo HOM05D006358 ORTHO05D008185 2.7e-102 375.9 247 74.9
FAN16G0252 Fragaria x ananassa HOM05D006358 ORTHO05D008185 2.7e-102 375.9 249 75.1
Thhalv10011532m.g Eutrema salsugineum HOM05D006358 ORTHO05D008185 7.8e-102 374.4 268 69.0
AUR62019212 Chenopodium quinoa HOM05D006358 ORTHO05D008185 1.3e-101 373.6 245 74.3
Hund07562 Selenicereus undatus HOM05D006358 ORTHO05D008185 2.3e-101 372.9 242 73.6
AUR62000042 Chenopodium quinoa HOM05D006358 ORTHO05D008185 3.9e-101 372.1 244 74.2
FAN11G2908 Fragaria x ananassa HOM05D000259 ORTHO05D008185 4.3e-100 368.6 257 72.8
FAN25G3418 Fragaria x ananassa HOM05D000259 ORTHO05D008185 2.1e-99 366.3 257 72.4
unitig_0.g179 Utricularia gibba HOM05D006358 ORTHO05D008185 2.8e-99 365.9 268 65.7
Lsat_1_v5_gn_1_68460 Lactuca sativa HOM05D006358 ORTHO05D008185 1.5e-97 360.1 235 74.0
Haze_23007 Corylus avellana HOM05D006358 ORTHO05D008185 1.3e-96 357.1 275 66.2
ATR0807G171 Amborella trichopoda HOM05D006358 ORTHO05D008185 1.3e-93 347.1 266 60.5
Dinv36328 Davidia involucrata HOM05D006358 ORTHO05D008185 1.5e-89 333.6 212 77.8
Phvul.007G005400 Phaseolus vulgaris HOM05D006358 ORTHO05D008185 2.7e-86 322.8 272 63.6
CDE04G2070 Ceratophyllum demersum HOM05D006358 ORTHO05D008185 2.5e-84 316.2 268 58.6
Sed0014420 Sechium edule HOM05D006358 ORTHO05D008185 4.3e-84 315.5 211 74.9
Gohir.D08G088366 Gossypium hirsutum HOM05D006358 ORTHO05D008185 2.4e-82 309.7 184 82.1
Atru.chr3.2139 Acer truncatum HOM05D006358 ORTHO05D008185 4.0e-82 308.9 182 82.4
MBI06_g07792_MAGBIO Magnolia biondii HOM05D006358 ORTHO05D008185 5.2e-82 308.5 240 64.2
Os07g0470700 Oryza sativa ssp. japonica HOM05D006358 ORTHO05D008185 1.3e-80 303.9 267 58.4
Zm00001eb320130 Zea mays HOM05D006358 ORTHO05D008185 5.3e-74 282.0 257 54.9
Pp3c6_24510 Physcomitrium patens HOM05D006358 ORTHO05D008185 1.6e-70 270.4 272 51.1
Mapoly0065s0038 Marchantia polymorpha HOM05D006358 ORTHO05D008185 7.8e-70 268.1 269 50.2
FAN17G2784 Fragaria x ananassa HOM05D006358 ORTHO05D008185 5.6e-60 235.3 135 85.2
AagrBONN_evm.TU.Sc2ySwM_340.166 Anthoceros agrestis HOM05D006358 ORTHO05D008185 1.8e-58 230.3 280 46.1
Hma1.2p1_0535F.1_g173790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 9.0e-58 228.0 166 67.5
Atru.BG.108.p Acer truncatum HOM05D006358 ORTHO05D008185 2.6e-57 226.5 131 84.7
QL01p009975 Quercus lobata HOM05D006358 ORTHO05D008185 7.1e-55 218.4 166 68.7
BcaB07g33599 Brassica carinata HOM05D006358 ORTHO05D008185 1.5e-52 210.7 136 77.2
SEGI_30485 Sequoiadendron giganteum HOM05D006358 ORTHO05D008185 4.0e-50 202.6 166 58.4
Nn2g15694 Nelumbo nucifera HOM05D006358 ORTHO05D008185 1.5e-41 174.1 266 39.1
SMO145G0194 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 1.2e-38 164.5 106 77.4
BcaC08g43283 Brassica carinata HOM05D006358 ORTHO05D008185 3.6e-38 162.9 141 57.4
BolC6t35742H Brassica oleracea HOM05D006358 ORTHO05D008185 3.6e-38 162.9 141 57.4
C06p06330 Brassica napus HOM05D000466 ORTHO05D000331 5.7e-36 155.6 170 48.8
Cre03.g176350 Chlamydomonas reinhardtii HOM05D006358 ORTHO05D008185 6.3e-35 152.1 330 34.5
Hma1.2p1_0238F.1_g099790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 4.5e-33 146.0 102 65.7
Cpa.g.sc1127.1 Carica papaya HOM05D006358 ORTHO05D008185 1.0e-32 144.8 116 62.1
Ah.06g193120 Amaranthus hybridus HOM05D000044 ORTHO05D000051 5.5e-31 139.0 100 60.0
MD03G1014600 Malus domestica HOM05D006358 ORTHO05D008185 2.3e-29 133.7 122 50.8
TWI60G1657 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 3.7e-27 126.3 144 50.7
MCO12G476 Micromonas commoda HOM05D006358 ORTHO05D008185 9.7e-20 101.7 128 46.9
HPP92_008465 Vanilla planifolia HOM05D006358 ORTHO05D008185 9.7e-20 101.7 114 44.7
Glyma.03G107232 Glycine max HOM05D006358 ORTHO05D000607 1.4e-18 97.8 111 50.5
CSS0018817 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 1.4e-13 81.3 45 88.9
CSS0000942 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 1.8e-13 80.9 51 68.6
TWI34G1842 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 9.7e-12 75.1 41 90.2
CSS0022118 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 1.3e-11 74.7 60 51.7
EL10As7g23744 Beta vulgaris HOM05D004524 ORTHO05D014474 4.8e-11 72.8 70 54.3
SMO222G0017 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 6.3e-11 72.4 118 45.8
SEGI_10329 Sequoiadendron giganteum HOM05D006358 ORTHO05D008185 1.7e-08 64.3 47 70.2
MCO09G399 Micromonas commoda HOM05D006358 ORTHO05D008185 9.4e-07 58.5 97 40.2


User provided reference genes

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