Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.4e-151 538.9 282 100.0
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.4e-151 538.9 282 100.0
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 7.4e-97 357.8 344 63.1
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 3.6e-91 339.0 294 67.3
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 2.2e-85 319.7 354 57.6
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 3.1e-79 299.3 343 54.8
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 6.8e-74 281.6 368 50.8
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 2.5e-68 263.1 367 48.0
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 1.8e-66 256.9 349 49.0
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 1.6e-59 233.8 370 43.2
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 2.8e-59 233.0 376 44.9
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 8.1e-59 231.5 377 44.6
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 8.9e-58 228.0 384 41.4
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 7.3e-36 155.2 383 35.8
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 5.1e-29 132.5 358 34.4
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 3.3e-28 129.8 400 32.8
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 9.6e-28 128.3 331 31.7
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 8.1e-27 125.2 383 31.9
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 4.0e-26 122.9 387 31.8
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 6.4e-24 115.5 330 30.6
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 2.7e-22 110.2 329 33.1
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.3e-21 107.8 351 31.1
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 1.1e-20 104.8 301 31.6
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 4.3e-20 102.8 347 28.2
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 4.0e-18 96.3 257 36.2
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 1.4e-15 87.8 269 32.0
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 2.3e-13 80.5 249 30.1
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 7.6e-09 65.5 130 35.4
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 6.5e-08 62.4 130 33.8
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 1.6e-06 57.8 115 36.5
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 7.9e-06 55.5 199 28.6


User provided reference genes

Program Settings