Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 5.7e-164 580.9 295 100.0
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 4.1e-130 468.4 316 78.2
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.5e-119 433.3 328 70.4
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.5e-119 431.4 298 73.5
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 4.0e-117 425.2 299 73.2
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 3.1e-109 399.1 307 70.4
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 4.0e-109 398.7 307 70.0
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 4.1e-106 388.7 280 72.5
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.6e-102 376.7 300 70.7
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.9e-98 363.2 301 63.1
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 8.6e-96 354.4 312 64.7
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 5.6e-95 351.7 305 62.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 9.5e-95 350.9 301 63.5
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.6e-94 349.0 300 61.7
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 3.6e-94 349.0 289 63.7
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.9e-91 339.3 301 59.5
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.1e-90 337.4 298 61.7
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.1e-90 335.5 305 61.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 7.1e-90 334.7 310 59.0
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.7e-89 332.8 305 62.6
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 7.8e-89 331.3 308 59.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.0e-88 330.9 292 61.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.0e-88 330.9 311 60.5
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.0e-88 330.9 296 63.2
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 3.9e-88 328.9 314 58.3
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 8.6e-88 327.8 292 61.3
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 8.6e-88 327.8 311 60.1
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.5e-87 326.2 292 61.0
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 2.5e-87 326.2 290 63.1
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 4.3e-87 325.5 308 61.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 7.3e-87 324.7 309 59.9
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.6e-86 323.6 312 59.3
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 3.6e-86 322.4 295 60.3
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.1e-85 320.9 295 60.0
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.4e-85 319.7 296 61.8
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.2e-85 318.5 288 60.8
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.2e-85 318.5 288 60.8
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 5.2e-85 318.5 339 55.8
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 6.8e-85 318.2 302 60.9
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 8.9e-85 317.8 289 61.6
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 4.4e-84 315.5 302 58.9
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 4.4e-84 315.5 297 58.9
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 4.9e-83 312.0 306 56.2
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.1e-82 310.8 329 55.0
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 2.7e-81 306.2 288 62.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.0e-80 304.3 306 55.6
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 3.9e-80 302.4 300 60.0
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 8.7e-80 301.2 304 55.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 9.6e-79 297.7 304 54.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.6e-78 297.0 274 59.9
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.4e-77 293.9 305 54.8
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.2e-76 290.8 293 55.6
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.0e-76 290.0 294 56.5
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 9.9e-76 287.7 290 55.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.9e-75 286.2 284 56.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 2.9e-75 286.2 286 55.9
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.9e-75 285.4 283 55.5
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 8.4e-75 284.6 304 54.6
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.1e-74 284.3 300 55.3
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 3.2e-74 282.7 288 55.2
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 3.2e-74 282.7 296 54.4
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.6e-73 280.4 295 55.9
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.7e-73 279.6 289 54.3
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 3.5e-73 279.3 293 53.9
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 7.8e-73 278.1 305 53.4
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.0e-72 276.2 289 54.7
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.0e-72 276.2 290 53.8
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 3.0e-72 276.2 289 53.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.9e-72 275.8 278 56.5
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 2.5e-71 273.1 280 61.4
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.3e-71 271.6 300 52.7
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 9.6e-71 271.2 337 48.1
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.6e-70 269.2 291 53.3
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.1e-69 267.7 282 55.7
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 1.8e-69 266.9 293 54.3
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 5.3e-69 265.4 343 46.9
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.2e-68 264.2 289 52.2
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.0e-68 263.5 361 45.4
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.4e-68 262.7 310 51.6
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 5.8e-68 261.9 246 56.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 5.8e-68 261.9 211 67.8
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 9.9e-68 261.2 294 48.3
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 7.1e-66 255.0 288 53.1
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 9.3e-66 254.6 299 50.5
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 7.9e-65 251.5 385 42.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.0e-60 236.9 296 52.7
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.6e-60 236.5 326 48.2
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 4.9e-59 232.3 282 49.3
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 4.9e-59 232.3 250 56.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 5.5e-58 228.8 127 83.5
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.8e-56 223.8 291 46.4
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 4.8e-54 215.7 272 45.2
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.9e-51 205.7 109 83.5
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 7.1e-50 201.8 109 84.4
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 8.7e-48 194.9 109 81.7
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 6.9e-45 185.3 120 70.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.2e-43 180.3 98 82.7
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 5.5e-42 175.6 210 50.5
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.6e-41 172.9 210 46.2
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 3.6e-41 172.9 98 81.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.9e-40 169.5 98 80.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 8.8e-40 168.3 88 87.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 3.1e-37 159.8 128 65.6
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.0e-36 157.1 124 58.9
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 5.9e-36 155.6 239 44.8
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 3.6e-33 146.4 98 72.4
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.6e-33 146.4 98 69.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 3.0e-32 143.3 217 44.2
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.2e-26 123.2 195 41.5
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 9.1e-21 105.1 118 56.8
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 4.5e-20 102.8 112 53.6
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.3e-19 101.3 190 41.1
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 6.3e-14 82.4 103 49.5
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.8e-13 80.9 102 45.1
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.8e-13 80.9 102 45.1
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 3.1e-13 80.1 102 45.1
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.2e-12 78.2 216 32.4
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.2e-11 73.9 42 76.2
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 8.5e-11 72.0 41 78.0
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.2e-10 68.9 176 34.1
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.1e-09 67.4 107 42.1
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.6e-09 66.6 196 32.7
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.7e-09 66.2 44 65.9
VMungo1309G0027 Vigna mungo HOM05D006626 ORTHO05D007352 2.6e-07 60.5 75 49.3


User provided reference genes

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