Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 4.6e-98 361.3 191 100.0
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 8.7e-73 277.3 192 78.6
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 2.2e-68 262.7 196 74.5
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 3.6e-63 245.4 192 73.4
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 6.9e-62 241.1 192 70.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.4e-59 233.4 192 68.8
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.2e-58 230.3 193 68.4
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 2.7e-58 229.2 193 66.8
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 3.5e-58 228.8 192 68.2
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 8.7e-57 224.2 190 66.3
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 1.9e-56 223.0 192 64.1
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.9e-56 223.0 192 66.1
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.3e-55 220.3 186 66.7
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.4e-53 212.2 189 63.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.0e-52 210.7 184 63.6
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.3e-52 210.3 191 61.3
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.4e-51 206.8 185 61.1
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.2e-51 205.3 189 60.8
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 7.1e-51 204.5 189 60.8
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 9.3e-51 204.1 188 59.0
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 2.1e-50 203.0 204 56.9
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 2.7e-50 202.6 190 61.6
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 7.9e-50 201.1 188 60.6
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.8e-49 199.9 180 62.2
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.3e-48 195.7 197 57.4
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.3e-48 195.7 197 57.4
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.3e-48 195.7 192 57.8
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 7.4e-48 194.5 188 57.4
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.3e-47 193.7 187 58.8
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.1e-47 193.0 195 57.4
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.7e-47 192.2 185 58.4
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 4.8e-47 191.8 188 61.7
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 8.2e-47 191.0 194 55.7
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 1.1e-46 190.7 186 59.1
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.1e-46 190.7 190 60.0
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 1.4e-46 190.3 189 58.2
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.1e-46 188.7 154 61.7
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 4.1e-46 188.7 191 58.6
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 9.0e-46 187.6 190 56.8
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 2.6e-45 186.0 193 57.5
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 3.4e-45 185.7 181 55.8
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 3.4e-45 185.7 185 55.7
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 5.9e-45 184.9 162 59.9
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 5.9e-45 184.9 186 55.9
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 5.9e-45 184.9 185 55.1
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.3e-44 183.7 186 55.9
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 1.3e-44 183.7 190 57.4
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.7e-44 183.3 185 56.2
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 1.7e-44 183.3 192 55.7
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 1.7e-44 183.3 192 56.8
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 2.2e-44 183.0 182 56.6
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 2.2e-44 183.0 202 54.0
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.9e-44 182.6 188 56.9
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 8.5e-44 181.0 185 55.7
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.1e-43 180.6 189 56.6
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.4e-43 180.3 185 55.1
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.4e-43 180.3 176 59.7
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.2e-43 178.7 191 55.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 4.2e-43 178.7 181 57.5
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 7.2e-43 177.9 146 63.0
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-42 176.8 181 58.0
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.1e-42 176.4 185 55.7
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 4.6e-42 175.3 197 51.8
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 4.6e-42 175.3 191 51.8
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.0e-41 174.1 162 56.8
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 2.3e-41 172.9 195 50.8
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 3.0e-41 172.6 190 54.2
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 3.9e-41 172.2 166 59.0
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 6.7e-41 171.4 136 64.0
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.9e-40 169.9 193 53.9
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.9e-40 169.9 193 53.9
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.9e-40 169.9 158 58.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 7.4e-40 167.9 132 66.7
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 9.7e-40 167.5 184 53.8
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.2e-39 166.4 175 56.0
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 6.3e-39 164.9 115 74.8
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.1e-38 164.1 142 59.9
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.4e-38 162.9 200 51.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 3.1e-38 162.5 129 65.1
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 5.3e-38 161.8 158 57.0
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.5e-37 160.2 199 50.8
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.5e-37 160.2 197 50.3
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 4.5e-37 158.7 190 47.9
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 2.9e-36 156.0 175 52.0
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 8.5e-36 154.5 182 51.1
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.1e-35 154.1 155 51.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.9e-35 153.3 143 56.6
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 2.1e-34 149.8 91 78.0
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 3.0e-33 146.0 194 45.4
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 6.7e-33 144.8 132 58.3
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 8.8e-33 144.4 190 48.4
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 5.7e-32 141.7 197 45.2
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 7.4e-32 141.4 115 63.5
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 2.8e-31 139.4 198 47.5
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 3.7e-31 139.0 90 72.2
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.9e-28 129.4 133 50.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 6.5e-28 128.3 135 58.5
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 9.4e-27 124.4 195 42.1
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.0e-25 120.9 148 54.1
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.5e-24 117.1 131 47.3
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 3.7e-23 112.5 154 44.2
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 8.2e-23 111.3 156 48.1
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 5.3e-22 108.6 183 41.5
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 8.0e-18 94.7 78 56.4
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 3.7e-15 85.9 114 42.1
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.4e-14 84.0 111 47.7
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.2e-13 80.9 108 42.6


User provided reference genes

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