Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.4e-93 347.1 292 100.0
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 2.0e-81 306.6 183 100.0
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 1.4e-69 267.3 180 74.4
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.4e-69 267.3 182 86.3
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 3.2e-66 256.1 181 73.5
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 6.0e-65 251.9 183 72.1
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 5.0e-64 248.8 182 73.1
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.6e-62 243.8 183 73.2
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 3.1e-61 239.6 183 66.1
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 4.1e-58 229.2 168 74.4
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 3.5e-57 226.1 181 69.1
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 3.0e-56 223.0 182 61.5
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 3.1e-53 213.0 183 59.6
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 1.5e-52 210.7 185 57.3
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.5e-52 210.7 185 57.3
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 7.6e-52 208.4 181 60.8
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 1.3e-51 207.6 183 55.7
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 3.8e-51 206.1 183 58.5
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 8.4e-51 204.9 183 61.2
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 8.4e-51 204.9 183 61.2
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 4.1e-50 202.6 292 67.8
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 9.2e-50 201.4 176 54.0
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.1e-49 200.3 183 60.7
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 3.9e-48 196.1 180 54.4
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 5.1e-48 195.7 186 54.3
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 2.5e-47 193.4 180 53.9
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.2e-46 191.0 183 53.0
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 2.1e-46 190.3 180 65.0
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 3.6e-46 189.5 181 51.9
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 4.0e-45 186.0 178 55.1
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 4.0e-45 186.0 178 55.1
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 4.0e-45 186.0 183 54.1
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 2.0e-44 183.7 182 52.2
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 2.6e-44 183.3 183 54.1
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 4.4e-44 182.6 180 53.3
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 5.8e-44 182.2 177 51.4
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 7.6e-44 181.8 177 54.8
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.2e-43 180.3 183 50.8
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 2.9e-43 179.9 181 54.1
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 6.4e-43 178.7 183 51.4
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 3.2e-42 176.4 183 59.0
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 5.4e-42 175.6 183 59.0
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 1.2e-41 174.5 183 59.0
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.5e-41 172.9 183 49.7
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 4.6e-41 172.6 183 58.5
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 1.0e-40 171.4 178 56.7
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 1.7e-40 170.6 183 51.4
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 2.3e-40 170.2 181 48.6
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 2.3e-40 170.2 180 49.4
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 3.9e-40 169.5 184 48.4
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 6.6e-40 168.7 182 48.4
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.1e-39 167.9 180 51.1
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 2.5e-39 166.8 182 47.3
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 3.3e-39 166.4 180 50.6
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 3.3e-39 166.4 184 47.8
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 3.3e-39 166.4 182 56.0
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 5.6e-39 165.6 181 47.0
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 7.3e-39 165.2 180 50.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 9.6e-39 164.9 183 61.2
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 3.6e-38 162.9 180 50.6
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 8.1e-38 161.8 179 49.2
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 1.8e-37 160.6 184 47.3
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 3.1e-37 159.8 184 47.3
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 4.0e-37 159.5 183 50.8
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 4.0e-37 159.5 180 48.9
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 5.3e-37 159.1 183 47.0
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 1.5e-36 157.5 180 46.7
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 2.0e-36 157.1 183 54.6
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 2.0e-36 157.1 178 48.3
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 3.4e-36 156.4 178 46.1
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 3.4e-36 156.4 180 46.7
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 9.9e-36 154.8 183 59.0
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 1.4e-34 151.0 179 49.7
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 3.2e-34 149.8 181 44.2
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 3.2e-34 149.8 180 46.1
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 7.1e-34 148.7 174 43.7
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 9.3e-34 148.3 176 42.6
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.0e-32 144.8 180 44.4
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 3.0e-32 143.3 178 52.2
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 2.5e-31 140.2 180 45.6
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 2.5e-31 140.2 180 45.6
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 5.6e-31 139.0 180 45.0
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 1.4e-29 134.4 183 43.7
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 2.4e-29 133.7 164 45.1
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 4.0e-29 132.9 177 41.2
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.5e-28 131.0 182 54.4
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 3.4e-28 129.8 169 45.0
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 4.5e-28 129.4 174 38.5
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 6.4e-27 125.6 182 40.7
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 1.1e-26 124.8 181 39.2
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 1.4e-26 124.4 153 54.9
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 2.7e-25 120.2 99 66.7
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 8.7e-24 115.2 182 50.5
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 3.3e-23 113.2 183 49.2
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 7.4e-23 112.1 180 49.4
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 1.6e-22 110.9 60 88.3
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 2.1e-22 110.5 182 38.5
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 8.2e-22 108.6 182 37.9
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 1.7e-19 100.9 177 48.0
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 2.5e-18 97.1 129 38.0
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 7.1e-18 95.5 98 46.9
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 1.0e-16 91.7 89 57.3
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 2.8e-14 83.6 148 29.7
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 8.2e-14 82.0 181 43.6
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 8.5e-11 72.0 171 42.1
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 4.2e-10 69.7 84 39.3
Glyma.10G286666 Glycine max HOM05D006667 ORTHO05D008387 6.7e-08 62.4 236 31.8
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 1.5e-07 61.2 64 48.4
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 1.3e-06 58.2 64 45.3
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 1.6e-06 57.8 93 40.9


User provided reference genes

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