Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 9.7e-86 320.1 159 100.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 2.8e-77 292.0 160 90.0
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.3e-74 283.1 159 88.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 2.2e-69 265.8 158 84.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 4.7e-64 248.1 158 77.8
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 6.3e-61 237.7 152 76.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.4e-60 235.7 162 74.7
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.6e-59 233.0 164 71.3
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 2.0e-59 232.6 161 72.7
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.5e-59 231.9 150 76.0
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 7.7e-59 230.7 161 72.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.5e-54 216.5 150 71.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.6e-54 215.7 158 69.0
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 4.9e-53 211.5 152 69.7
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 6.3e-53 211.1 154 68.2
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 8.3e-53 210.7 153 66.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 8.3e-53 210.7 152 68.4
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.1e-52 210.3 154 67.5
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.4e-52 209.9 163 65.0
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.4e-52 209.1 158 67.7
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 9.2e-52 207.2 153 68.6
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 2.0e-51 206.1 160 67.5
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 4.6e-51 204.9 156 67.9
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 5.9e-51 204.5 164 63.4
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.9e-51 204.5 153 67.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 5.9e-51 204.5 159 66.7
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 5.9e-51 204.5 153 64.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.0e-50 203.8 155 65.8
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.0e-50 203.8 160 66.9
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.0e-50 203.8 153 69.3
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.3e-50 203.4 152 67.1
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.3e-50 203.4 152 67.1
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.7e-50 203.0 148 69.6
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.9e-50 202.2 145 69.0
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.9e-50 202.2 152 66.4
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.9e-50 201.8 158 65.8
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 6.6e-50 201.1 152 66.4
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.6e-50 201.1 148 72.3
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 6.6e-50 201.1 152 66.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 8.6e-50 200.7 152 67.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.5e-49 199.9 159 64.2
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.5e-49 199.1 152 67.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.3e-49 198.7 154 66.9
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.2e-48 196.8 154 64.9
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 8.0e-48 194.1 151 66.2
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 8.0e-48 194.1 152 64.5
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.0e-47 193.7 150 63.3
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.8e-47 193.0 152 65.1
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 2.3e-47 192.6 162 63.6
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.3e-47 192.6 142 68.3
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 5.2e-47 191.4 144 68.1
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 6.8e-47 191.0 167 62.9
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 4.4e-46 188.3 156 62.2
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 9.8e-46 187.2 150 60.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 9.8e-46 187.2 154 63.6
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.3e-45 186.8 160 65.0
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.2e-45 186.0 150 62.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 2.9e-45 185.7 152 62.5
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.7e-45 185.3 183 56.8
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 4.9e-45 184.9 141 64.5
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 6.4e-45 184.5 150 61.3
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 8.3e-45 184.1 143 65.0
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.4e-44 183.3 209 49.3
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.4e-44 183.3 145 64.1
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.4e-44 182.6 142 65.5
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 3.2e-44 182.2 150 58.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 3.2e-44 182.2 160 62.5
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 4.1e-44 181.8 150 58.7
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 4.1e-44 181.8 150 60.0
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 5.4e-44 181.4 152 62.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 5.4e-44 181.4 150 60.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 5.4e-44 181.4 149 59.7
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 9.2e-44 180.6 158 57.0
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.5e-43 178.7 163 61.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 4.6e-43 178.3 163 55.8
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 4.6e-43 178.3 160 55.0
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 6.0e-43 177.9 156 59.0
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.0e-42 177.2 156 57.7
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 3.9e-42 175.3 143 59.4
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 4.3e-41 171.8 145 62.1
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 6.8e-39 164.5 155 56.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.2e-38 163.7 144 60.4
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 8.3e-37 157.5 148 54.7
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 2.8e-32 142.5 131 52.7
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.9e-28 129.8 140 47.9
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 7.8e-27 124.4 112 52.7
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.8e-23 113.2 144 42.4
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 7.6e-22 107.8 64 79.7
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 3.8e-21 105.5 98 52.0
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 7.8e-19 97.8 136 38.2
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 7.8e-19 97.8 99 54.5
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 9.6e-17 90.9 67 59.7
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 1.7e-13 80.1 79 51.9
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.1e-12 77.4 79 54.4
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.6e-11 73.6 70 50.0
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 3.0e-10 69.3 72 55.6
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 5.1e-10 68.6 106 35.8
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 4.3e-09 65.5 64 50.0


User provided reference genes

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