Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 1.0e-51 206.5 103 100.0
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 7.5e-47 190.3 107 90.7
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 2.2e-46 188.7 103 90.3
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 3.7e-46 188.0 106 89.6
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 3.0e-43 178.3 105 87.6
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 4.3e-42 174.5 107 82.2
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 1.2e-41 172.9 101 86.1
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 1.6e-41 172.6 103 86.4
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 1.6e-41 172.6 104 86.5
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 3.6e-41 171.4 104 84.6
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 4.7e-41 171.0 104 83.7
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 6.2e-41 170.6 103 82.5
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 8.0e-41 170.2 102 86.3
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 8.0e-41 170.2 102 86.3
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 1.1e-40 169.9 103 87.4
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 1.4e-40 169.5 103 84.5
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 1.8e-40 169.1 103 82.5
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 1.8e-40 169.1 102 84.3
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 1.8e-40 169.1 103 85.4
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 1.8e-40 169.1 103 82.5
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 4.0e-40 167.9 103 84.5
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 6.8e-40 167.2 104 83.7
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 8.9e-40 166.8 103 81.6
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 8.9e-40 166.8 104 82.7
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 8.9e-40 166.8 104 83.7
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 1.2e-39 166.4 103 80.6
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 1.2e-39 166.4 103 85.4
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 1.2e-39 166.4 103 81.6
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.6e-39 165.2 104 83.7
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 2.6e-39 165.2 104 83.7
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 2.6e-39 165.2 104 83.7
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 2.6e-39 165.2 104 80.8
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 3.4e-39 164.9 104 81.7
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 4.4e-39 164.5 103 83.5
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 4.4e-39 164.5 103 82.5
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 4.4e-39 164.5 103 83.5
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 5.8e-39 164.1 104 82.7
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 5.8e-39 164.1 103 80.6
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 7.5e-39 163.7 103 80.6
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 7.5e-39 163.7 103 79.6
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 7.5e-39 163.7 104 80.8
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 9.8e-39 163.3 104 81.7
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 9.8e-39 163.3 104 81.7
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 9.8e-39 163.3 104 81.7
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 9.8e-39 163.3 102 79.4
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 9.8e-39 163.3 103 78.6
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 9.8e-39 163.3 103 79.6
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 9.8e-39 163.3 103 80.6
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 80.6
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 82.7
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 1.3e-38 162.9 103 78.6
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 1.7e-38 162.5 103 80.6
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.7e-38 162.5 105 81.0
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 1.7e-38 162.5 103 86.4
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 1.7e-38 162.5 103 83.5
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 1.7e-38 162.5 103 83.5
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 2.2e-38 162.2 103 80.6
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 2.2e-38 162.2 103 81.6
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 2.2e-38 162.2 102 81.4
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 2.2e-38 162.2 103 81.6
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 2.9e-38 161.8 103 77.7
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 2.9e-38 161.8 103 77.7
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 2.9e-38 161.8 106 79.2
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 2.9e-38 161.8 103 77.7
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.9e-38 161.8 105 80.0
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 3.7e-38 161.4 104 78.8
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 3.7e-38 161.4 103 77.7
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 3.7e-38 161.4 103 77.7
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 3.7e-38 161.4 102 81.4
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 4.9e-38 161.0 104 81.7
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 4.9e-38 161.0 104 81.7
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 6.4e-38 160.6 103 81.6
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 6.4e-38 160.6 102 78.4
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 6.4e-38 160.6 102 78.4
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 6.4e-38 160.6 103 83.5
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 6.4e-38 160.6 104 80.8
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 8.3e-38 160.2 99 84.8
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 1.9e-37 159.1 104 80.8
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 1.9e-37 159.1 103 79.6
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 3.2e-37 158.3 103 79.6
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 4.1e-37 157.9 104 76.9
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 7.0e-37 157.1 103 77.7
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 7.0e-37 157.1 103 75.7
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 1.2e-36 156.4 104 78.8
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 1.2e-36 156.4 104 78.8
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.6e-36 156.0 104 79.8
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 2.7e-36 155.2 103 77.7
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 4.6e-36 154.5 103 74.8
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 4.6e-36 154.5 106 73.6
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 4.6e-36 154.5 106 73.6
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 6.0e-36 154.1 105 77.1
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 6.0e-36 154.1 103 73.8
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 6.0e-36 154.1 106 73.6
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 6.0e-36 154.1 106 73.6
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 7.8e-36 153.7 103 78.6
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.3e-35 152.9 106 72.6
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 3.9e-35 151.4 92 83.7
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 3.9e-35 151.4 92 83.7
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 3.9e-35 151.4 100 79.0
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 5.1e-35 151.0 98 76.5
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 5.1e-35 151.0 97 82.5
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 5.1e-35 151.0 96 82.3
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 6.6e-35 150.6 105 76.2
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 6.6e-35 150.6 106 77.4
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 8.6e-35 150.2 92 82.6
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 2.5e-34 148.7 101 76.2
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 5.6e-34 147.5 103 74.8
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 6.2e-33 144.1 96 76.0
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.3e-32 142.1 73 91.8
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 3.1e-32 141.7 94 75.5
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 4.0e-32 141.4 96 72.9
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.6e-31 138.7 94 74.5
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 8.3e-30 133.7 77 80.5
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 1.1e-29 133.3 76 80.3
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 3.2e-29 131.7 73 84.9
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 7.1e-29 130.6 69 87.0
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 4.0e-24 114.8 86 68.6
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 3.4e-23 111.7 70 71.4
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 7.6e-23 110.5 73 68.5
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 2.9e-22 108.6 69 69.6
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 2.7e-20 102.1 72 63.9
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 2.7e-20 102.1 57 84.2
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 6.0e-20 100.9 68 75.0
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 6.0e-20 100.9 68 75.0
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.9e-18 95.9 54 83.3
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 2.8e-17 92.0 105 60.0
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 3.6e-17 91.7 70 57.1
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 1.4e-16 89.7 65 60.0
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 5.3e-16 87.8 55 65.5
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.2e-15 86.7 103 50.5
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 4.8e-09 64.7 67 49.3


User provided reference genes

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