Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.8e-134 482.6 254 100.0
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 8.5e-100 367.5 280 72.9
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 8.5e-100 367.5 276 73.6
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 3.7e-95 352.1 293 67.6
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 8.5e-84 314.3 315 57.8
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 9.4e-83 310.8 318 57.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 8.0e-82 307.8 332 55.4
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 2.0e-80 303.1 339 54.6
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 7.5e-80 301.2 339 54.3
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 9.7e-80 300.8 319 56.7
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-78 297.0 333 54.7
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 5.4e-70 268.5 320 49.7
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 9.1e-70 267.7 332 48.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.5e-67 260.4 311 51.1
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 4.2e-67 258.8 330 49.4
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 2.1e-66 256.5 329 48.9
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 3.6e-66 255.8 311 49.8
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 4.7e-66 255.4 329 48.9
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-65 253.8 301 50.8
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.4e-65 253.8 311 48.2
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 3.0e-65 252.7 318 48.7
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 4.0e-65 252.3 341 46.6
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 5.2e-65 251.9 307 49.2
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 5.2e-65 251.9 282 50.7
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 6.8e-65 251.5 318 47.5
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 8.8e-65 251.1 309 49.2
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 8.8e-65 251.1 309 50.2
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 8.8e-65 251.1 322 47.2
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 8.8e-65 251.1 337 47.5
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.2e-64 250.8 335 46.9
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-64 250.8 309 50.2
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-64 250.4 369 45.5
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.0e-64 250.0 323 47.7
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.0e-64 250.0 306 50.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.4e-64 249.2 321 48.6
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 4.4e-64 248.8 325 47.1
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.7e-64 248.4 305 49.5
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 9.8e-64 247.7 328 47.0
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.3e-63 247.3 304 47.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.3e-63 247.3 304 47.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.3e-63 247.3 321 47.7
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.7e-63 245.7 307 49.2
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 3.7e-63 245.7 314 47.8
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 3.7e-63 245.7 330 45.8
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.4e-62 243.8 322 46.6
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.8e-62 243.4 328 45.1
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.8e-62 243.4 301 47.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.4e-62 243.0 315 46.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.4e-62 243.0 315 49.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 2.4e-62 243.0 322 47.2
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 2.4e-62 243.0 309 48.5
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.1e-62 242.3 300 48.3
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 7.0e-62 241.5 309 48.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 9.2e-62 241.1 317 45.4
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.2e-61 240.7 311 46.3
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.6e-61 240.4 315 45.1
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.6e-61 240.4 318 47.8
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.0e-61 240.0 326 44.2
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.0e-61 240.0 309 47.6
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.7e-61 239.6 309 46.3
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 2.7e-61 239.6 324 44.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 3.5e-61 239.2 322 46.0
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 5.9e-61 238.4 315 45.7
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 5.9e-61 238.4 340 43.8
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.7e-61 238.0 322 47.2
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.7e-60 236.9 321 46.4
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 8.6e-60 234.6 340 45.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.9e-59 233.4 315 44.4
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 4.3e-59 232.3 316 45.3
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 7.3e-59 231.5 316 44.9
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.1e-58 229.9 309 46.3
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.8e-58 229.6 322 45.0
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.6e-58 229.2 291 47.1
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.0e-57 227.6 300 46.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 2.3e-57 226.5 303 46.2
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.2e-57 225.3 201 61.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.5e-56 223.8 187 64.2
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 5.7e-56 221.9 189 65.1
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.7e-56 221.9 214 59.3
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 6.4e-55 218.4 270 50.0
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.1e-54 217.6 334 40.7
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.2e-54 216.1 189 60.8
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 3.2e-54 216.1 318 43.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 3.2e-54 216.1 431 37.4
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.3e-52 210.7 193 59.1
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 3.0e-52 209.5 330 42.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 3.0e-52 209.5 194 58.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.9e-51 206.8 312 41.0
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 6.2e-50 201.8 330 41.5
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.5e-48 197.2 322 40.4
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 3.4e-48 196.1 303 43.6
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.4e-48 196.1 319 42.3
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.7e-42 175.6 174 58.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 5.2e-41 172.2 186 52.2
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 2.1e-34 150.2 130 64.6
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.8e-34 149.8 201 49.8
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 4.1e-30 136.0 189 40.7
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 6.0e-29 132.1 216 41.2
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.5e-27 126.7 393 28.5
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 6.2e-26 122.1 196 40.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 9.3e-22 108.2 74 74.3
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.0e-21 105.5 80 70.0
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.4e-17 93.6 130 43.1
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 2.0e-16 90.5 200 33.0
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.3e-14 81.6 178 30.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.6e-13 80.9 177 30.5
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 4.6e-13 79.3 221 30.3
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 7.4e-11 72.0 41 75.6
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 7.4e-11 72.0 199 31.2
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.6e-10 70.9 52 65.4
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 2.1e-10 70.5 143 38.5
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 3.6e-10 69.7 41 75.6
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 4.8e-10 69.3 47 68.1
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.4e-09 67.8 47 66.0
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 1.8e-09 67.4 47 66.0
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 5.3e-09 65.9 45 66.7
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.0e-08 63.9 54 63.0
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.3e-07 61.2 57 54.4
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 2.9e-07 60.1 43 67.4


User provided reference genes

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