Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 3.2e-80 301.6 143 100.0
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 1.7e-41 172.9 154 66.9
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 5.7e-37 157.9 146 60.3
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 4.1e-35 151.8 148 55.4
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 1.6e-34 149.8 138 60.9
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 6.8e-30 134.4 152 52.0
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 4.4e-29 131.7 152 50.7
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 1.1e-27 127.1 136 56.6
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 5.6e-24 114.8 72 68.1
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 2.6e-21 105.9 144 46.5
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 1.3e-17 93.6 137 41.6
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 5.0e-17 91.7 133 42.1
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 5.6e-16 88.2 139 39.6
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 7.3e-16 87.8 133 38.3
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 7.3e-16 87.8 134 42.5
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 7.3e-16 87.8 117 41.0
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 1.2e-15 87.0 133 41.4
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 2.8e-15 85.9 134 40.3
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 1.4e-14 83.6 112 42.0
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 1.4e-14 83.6 134 39.6
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 1.8e-14 83.2 126 40.5
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 3.1e-14 82.4 136 39.7
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 4.0e-14 82.0 135 38.5
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 8.9e-14 80.9 136 40.4
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 8.9e-14 80.9 52 65.4
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 2.0e-13 79.7 137 36.5
Lj5g0000209 Lotus japonicus HOM05D007757 ORTHO05D009619 2.6e-13 79.3 68 55.9
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 5.8e-13 78.2 146 37.7
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 7.5e-13 77.8 138 38.4
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 2.2e-12 76.3 118 39.8
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.2e-12 76.3 69 49.3
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 8.3e-12 74.3 52 55.8
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 1.1e-11 73.9 52 55.8
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 1.4e-11 73.6 76 44.7
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 3.2e-11 72.4 52 53.8
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 1.6e-10 70.1 57 52.6
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 1.6e-10 70.1 129 37.2
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 2.7e-10 69.3 108 38.9
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 2.7e-10 69.3 134 38.8
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 6.0e-10 68.2 112 39.3
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 1.0e-09 67.4 45 60.0
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 1.7e-09 66.6 50 54.0
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 3.0e-09 65.9 45 57.8
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 3.0e-09 65.9 47 55.3
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 3.9e-09 65.5 47 55.3
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 5.1e-09 65.1 50 52.0
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 5.1e-09 65.1 50 52.0
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 5.1e-09 65.1 50 52.0
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 5.1e-09 65.1 96 44.8
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 6.6e-09 64.7 83 38.6
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 6.6e-09 64.7 83 38.6
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 6.6e-09 64.7 83 38.6
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.1e-08 63.9 141 36.9
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 1.1e-08 63.9 137 35.8
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 2.5e-08 62.8 46 52.2
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 2.5e-08 62.8 50 50.0
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 2.5e-08 62.8 50 50.0
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 2.5e-08 62.8 50 48.0
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 2.5e-08 62.8 141 36.2
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 3.3e-08 62.4 141 36.2
Nn3g17848 Nelumbo nucifera HOM05D021434 ORTHO05D009619 3.3e-08 62.4 76 36.8
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 5.6e-08 61.6 40 55.0
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 5.6e-08 61.6 52 53.8
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 7.3e-08 61.2 50 48.0
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 9.5e-08 60.8 44 54.5
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 1.2e-07 60.5 50 48.0
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 1.6e-07 60.1 113 39.8
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 1.6e-07 60.1 40 55.0
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 1.6e-07 60.1 142 36.6
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.6e-07 58.9 43 53.5
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.6e-07 58.9 41 51.2
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 1.1e-06 57.4 43 51.2
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 6.8e-06 54.7 129 32.6
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 8.9e-06 54.3 48 56.2


User provided reference genes

Program Settings