Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11157_v3 Cicer arietinum L. HOM05D001683 ORTHO05D001627 6.4e-67 257.3 131 100.0
TPR.G4850 Trifolium pratense HOM05D001683 ORTHO05D001627 3.2e-26 122.1 88 79.5
Medtr1g110410 Medicago truncatula HOM05D001683 ORTHO05D001627 4.3e-23 111.7 88 75.0
Lj5g0020104 Lotus japonicus HOM05D001683 ORTHO05D001627 5.6e-23 111.3 89 71.9
Glyma.10G272700 Glycine max HOM05D001683 ORTHO05D001627 2.1e-22 109.4 90 70.0
Phvul.007G029000 Phaseolus vulgaris HOM05D001683 ORTHO05D001627 1.8e-21 106.3 90 70.0
Psat6g226000 Pisum sativum HOM05D001683 ORTHO05D001627 1.8e-21 106.3 98 61.2
VMungo0720G1852 Vigna mungo HOM05D001683 ORTHO05D001627 1.8e-21 106.3 93 68.8
Glyma.20G117200 Glycine max HOM05D001683 ORTHO05D001627 3.1e-21 105.5 114 57.9
Potri.010G122800 Populus trichocarpa HOM05D001683 ORTHO05D001627 1.4e-18 96.7 97 60.8
Potri.008G122300 Populus trichocarpa HOM05D001683 ORTHO05D001627 3.2e-18 95.5 118 52.5
Sabra08G0092900 Salix brachista HOM05D001683 ORTHO05D001627 5.5e-18 94.7 86 62.8
Lalb_Chr06g0165991 Lupinus albus HOM05D001683 ORTHO05D001627 2.1e-17 92.8 86 68.6
Thecc.02G225800 Theobroma cacao HOM05D001683 ORTHO05D001627 1.0e-16 90.5 86 61.6
CiPaw.06G018600 Carya illinoinensis HOM05D001683 ORTHO05D001627 1.3e-16 90.1 127 50.4
Dinv21060 Davidia involucrata HOM05D001683 ORTHO05D001627 1.3e-16 90.1 91 60.4
Duzib268G0315 Durio zibethinus HOM05D001683 ORTHO05D001627 1.3e-16 90.1 86 60.5
Manes.06G066400 Manihot esculenta HOM05D001683 ORTHO05D001627 1.3e-16 90.1 86 62.8
TWI79G0321 Tripterygium wilfordii HOM05D001683 ORTHO05D001627 1.3e-16 90.1 86 61.6
QL01p040776 Quercus lobata HOM05D001683 ORTHO05D001627 1.8e-16 89.7 132 47.7
CiPaw.05G239500 Carya illinoinensis HOM05D001683 ORTHO05D001627 8.7e-16 87.4 128 49.2
Sabra10G0092900 Salix brachista HOM05D001683 ORTHO05D001627 8.7e-16 87.4 98 56.1
FAN07G0615 Fragaria x ananassa HOM05D001683 ORTHO05D001627 1.1e-15 87.0 85 61.2
FAN17G0119 Fragaria x ananassa HOM05D001683 ORTHO05D001627 1.1e-15 87.0 85 61.2
FAN22G0009 Fragaria x ananassa HOM05D001683 ORTHO05D001627 1.1e-15 87.0 85 61.2
Manes.14G104500 Manihot esculenta HOM05D001683 ORTHO05D001627 1.1e-15 87.0 86 62.8
FAN12G0834 Fragaria x ananassa HOM05D001683 ORTHO05D001627 7.4e-15 84.3 85 60.0
FAN12G2223 Fragaria x ananassa HOM05D001683 ORTHO05D001627 7.4e-15 84.3 85 60.0
Dinv31621 Davidia involucrata HOM05D001683 ORTHO05D001627 9.6e-15 84.0 87 60.9
Haze_00621 Corylus avellana HOM05D001683 ORTHO05D001627 1.3e-14 83.6 86 64.0
RcHm_v2.0_Chr4g0434861 Rosa chinensis HOM05D001683 ORTHO05D001627 1.6e-14 83.2 85 60.0
Lj6P755T13 Lonicera japonica HOM05D001683 ORTHO05D001627 2.1e-14 82.8 112 50.9
COL.COLO4_33492 Corchorus olitorius HOM05D001683 ORTHO05D001627 2.8e-14 82.4 87 60.9
PGR119G1484 Punica granatum HOM05D001683 ORTHO05D001627 4.8e-14 81.6 86 62.8
Atru.chr11.146 Acer truncatum HOM05D001683 ORTHO05D001627 1.1e-13 80.5 100 56.0
Gohir.A01G185900 Gossypium hirsutum HOM05D001683 ORTHO05D001627 1.1e-13 80.5 86 57.0
Lalb_Chr21g0308831 Lupinus albus HOM05D001683 ORTHO05D001627 1.1e-13 80.5 87 64.4
Gohir.D01G176500 Gossypium hirsutum HOM05D001683 ORTHO05D001627 1.4e-13 80.1 86 55.8
MD16G1040500 Malus domestica HOM05D001683 ORTHO05D001627 1.4e-13 80.1 86 59.3
Sed0014288 Sechium edule HOM05D001683 ORTHO05D001627 2.4e-13 79.3 86 55.8
Eucgr.G02309 Eucalyptus grandis HOM05D001683 ORTHO05D001627 3.1e-13 79.0 90 52.2
Ciclev10017573m.g Citrus clementina HOM05D001683 ORTHO05D001627 4.1e-13 78.6 97 54.6
DCAR_030169 Daucus carota HOM05D001683 ORTHO05D001627 1.5e-12 76.6 87 55.2
TAR629G2615 Trochodendron aralioides HOM05D001683 ORTHO05D001627 1.5e-12 76.6 86 58.1
Gorai.002G218800 Gossypium raimondii HOM05D001683 ORTHO05D001627 2.6e-12 75.9 122 42.6
Prupe.1G313600 Prunus persica HOM05D001683 ORTHO05D001627 3.4e-12 75.5 97 54.6
Atru.chr9.868 Acer truncatum HOM05D001683 ORTHO05D001627 1.0e-11 73.9 72 55.6
DCAR_023647 Daucus carota HOM05D001683 ORTHO05D001627 1.3e-11 73.6 97 51.5
MD13G1039600 Malus domestica HOM05D001683 ORTHO05D001627 2.2e-11 72.8 86 55.8
Nn3g17892 Nelumbo nucifera HOM05D001683 ORTHO05D001627 2.2e-11 72.8 86 51.2
Cc11_g09960 Coffea canephora HOM05D001683 ORTHO05D001627 2.9e-11 72.4 103 46.6
MELO3C011526.2 Cucumis melo HOM05D001683 ORTHO05D001627 2.9e-11 72.4 96 54.2
CsaV3_6G003260 Cucumis sativus L. HOM05D001683 ORTHO05D001627 3.8e-11 72.0 96 54.2
ClCG08G004940 Citrullus lanatus HOM05D001683 ORTHO05D001627 5.0e-11 71.6 85 58.8
Actinidia16666 Actinidia chinensis HOM05D001683 ORTHO05D001627 6.5e-11 71.2 96 54.2
Ah.16g101710 Amaranthus hybridus HOM05D001683 ORTHO05D001627 6.5e-11 71.2 100 46.0
Hma1.2p1_1875F.1_g306280 Hydrangea macrophylla HOM05D001683 ORTHO05D001627 6.5e-11 71.2 92 47.8
TAR622G0857 Trochodendron aralioides HOM05D001683 ORTHO05D001627 8.4e-11 70.9 86 54.7
SalBow5G3454 Salvia bowleyana HOM05D001683 ORTHO05D001627 1.1e-10 70.5 86 52.3
Glyma.06G147200 Glycine max HOM05D001683 ORTHO05D001627 2.5e-10 69.3 84 52.4
Lj2A441T54 Lonicera japonica HOM05D001683 ORTHO05D001627 2.5e-10 69.3 85 51.8
Phvul.003G044800 Phaseolus vulgaris HOM05D001683 ORTHO05D001627 2.5e-10 69.3 86 52.3
Cc07_g08750 Coffea canephora HOM05D001683 ORTHO05D001627 3.2e-10 68.9 86 46.5
Lsat_1_v5_gn_8_40701 Lactuca sativa HOM05D001683 ORTHO05D001627 4.2e-10 68.6 113 46.0
Sed0006881 Sechium edule HOM05D001683 ORTHO05D001627 4.2e-10 68.6 87 55.2
MSTRG.13544 Avicennia marina HOM05D001683 ORTHO05D001627 9.3e-10 67.4 86 53.5
EL10Ac2g04558 Beta vulgaris HOM05D001683 ORTHO05D001627 9.3e-10 67.4 86 50.0
TAR374G1495 Trochodendron aralioides HOM05D001683 ORTHO05D001627 9.3e-10 67.4 86 54.7
CARHR061040 Cardamine hirsuta HOM05D001683 ORTHO05D001627 1.2e-09 67.0 86 48.8
Duzib138G0828 Durio zibethinus HOM05D001683 ORTHO05D001627 1.2e-09 67.0 86 55.8
Actinidia38374 Actinidia chinensis HOM05D001683 ORTHO05D001627 1.6e-09 66.6 98 46.9
Oeu039733.1 Olea europaea HOM05D001683 ORTHO05D001627 1.6e-09 66.6 86 45.3
QL02p051064 Quercus lobata HOM05D001683 ORTHO05D001627 1.6e-09 66.6 86 48.8
QL12p016580 Quercus lobata HOM05D001683 ORTHO05D001627 1.6e-09 66.6 86 48.8
PGSC0003DMG400014551 Solanum tuberosum HOM05D001683 ORTHO05D001627 2.1e-09 66.2 105 45.7
MSTRG.851 Avicennia marina HOM05D001683 ORTHO05D001627 2.7e-09 65.9 91 47.3
CAN.G610.64 Capsicum annuum HOM05D001683 ORTHO05D001627 2.7e-09 65.9 95 45.3
Migut.L00326 Erythranthe guttata HOM05D001683 ORTHO05D001627 2.7e-09 65.9 98 48.0
Sopen05g004930 Solanum pennellii HOM05D001683 ORTHO05D001627 2.7e-09 65.9 88 48.9
SGA_v2.0_scaffold170G38778 Striga asiatica HOM05D001683 ORTHO05D001627 2.7e-09 65.9 86 50.0
AT1G68330 Arabidopsis thaliana HOM05D001683 ORTHO05D001627 3.5e-09 65.5 86 48.8
AL2G27170 Arabidopsis lyrata HOM05D001683 ORTHO05D001627 4.6e-09 65.1 86 48.8
CiPaw.04G042800 Carya illinoinensis HOM05D001683 ORTHO05D001627 4.6e-09 65.1 86 46.5
Cc04_g07030 Coffea canephora HOM05D001683 ORTHO05D001627 4.6e-09 65.1 87 44.8
COL.COLO4_09345 Corchorus olitorius HOM05D001683 ORTHO05D001627 4.6e-09 65.1 86 53.5
Thhalv10019574m.g Eutrema salsugineum HOM05D001683 ORTHO05D001627 4.6e-09 65.1 87 47.1
MSTRG.15300 Avicennia marina HOM05D001683 ORTHO05D001627 6.1e-09 64.7 86 48.8
Dinv33952 Davidia involucrata HOM05D001683 ORTHO05D001627 6.1e-09 64.7 86 51.2
Manes.01G111000 Manihot esculenta HOM05D001683 ORTHO05D001627 6.1e-09 64.7 86 51.2
THA.LOC104808345 Tarenaya hassleriana HOM05D001683 ORTHO05D001627 6.1e-09 64.7 86 51.2
Potri.004G098700 Populus trichocarpa HOM05D001683 ORTHO05D001627 7.9e-09 64.3 86 51.2
Manes.02G069500 Manihot esculenta HOM05D001683 ORTHO05D001627 1.3e-08 63.5 86 50.0
Oeu059017.1 Olea europaea HOM05D001683 ORTHO05D001627 1.3e-08 63.5 86 43.0
BcaB03g15410 Brassica carinata HOM05D001683 ORTHO05D001627 1.8e-08 63.2 87 48.3
Carub.0002s1483 Capsella rubella HOM05D001683 ORTHO05D001627 1.8e-08 63.2 86 46.5
Sabra04G0081100 Salix brachista HOM05D001683 ORTHO05D001627 1.8e-08 63.2 86 51.2
Sp5g23390 Schrenkiella parvula HOM05D001683 ORTHO05D001627 1.8e-08 63.2 87 47.1
MBI09_g39172_MAGBIO Magnolia biondii HOM05D001683 ORTHO05D001627 2.3e-08 62.8 92 50.0
Aqoxy3G00255 Aquilegia oxysepala HOM05D001683 ORTHO05D001627 3.0e-08 62.4 88 51.1
Migut.E00357 Erythranthe guttata HOM05D001683 ORTHO05D001627 3.0e-08 62.4 86 48.8
Thecc.04G132600 Theobroma cacao HOM05D001683 ORTHO05D001627 3.0e-08 62.4 86 53.5
MSTRG.23579 Avicennia marina HOM05D001683 ORTHO05D001627 3.9e-08 62.0 84 51.2
Ah.10g037730 Amaranthus hybridus HOM05D001683 ORTHO05D001627 5.1e-08 61.6 109 40.4
BcaB05g24364 Brassica carinata HOM05D001683 ORTHO05D001627 5.1e-08 61.6 87 47.1
MBI16_g05563_MAGBIO Magnolia biondii HOM05D001683 ORTHO05D001627 5.1e-08 61.6 86 46.5
Oeu016625.1 Olea europaea HOM05D001683 ORTHO05D001627 6.7e-08 61.2 86 48.8
Oeu050376.1 Olea europaea HOM05D001683 ORTHO05D001627 6.7e-08 61.2 86 50.0
THA.LOC104821916 Tarenaya hassleriana HOM05D001683 ORTHO05D001627 6.7e-08 61.2 88 51.1
vmacro17706 Vaccinium macrocarpon HOM05D001683 ORTHO05D001627 6.7e-08 61.2 88 44.3
Cpa.g.sc170.65 Carica papaya HOM05D001683 ORTHO05D001627 8.7e-08 60.8 86 50.0
Eucgr.F02503 Eucalyptus grandis HOM05D001683 ORTHO05D001627 8.7e-08 60.8 115 42.6
Nitab4.5_0004416g0110 Nicotiana tabacum HOM05D001683 ORTHO05D001627 8.7e-08 60.8 87 43.7
Phvul.008G006900 Phaseolus vulgaris HOM05D001683 ORTHO05D001627 8.7e-08 60.8 89 44.9
Atru.chr1.1666 Acer truncatum HOM05D001683 ORTHO05D001627 1.1e-07 60.5 94 47.9
Glyma.18G295900 Glycine max HOM05D001683 ORTHO05D001627 1.1e-07 60.5 109 38.5
Hma1.2p1_1109F.1_g258100 Hydrangea macrophylla HOM05D001683 ORTHO05D001627 1.1e-07 60.5 86 46.5
Phvul.004G065200 Phaseolus vulgaris HOM05D001683 ORTHO05D001627 1.1e-07 60.5 101 41.6
BcaC08g45979 Brassica carinata HOM05D001683 ORTHO05D001627 1.5e-07 60.1 87 47.1
A07p32040 Brassica napus HOM05D001683 ORTHO05D001627 1.5e-07 60.1 87 47.1
C06p37700 Brassica napus HOM05D001683 ORTHO05D001627 1.5e-07 60.1 87 47.1
BolC6t38872H Brassica oleracea HOM05D001683 ORTHO05D001627 1.5e-07 60.1 87 47.1
BraA07t30834Z Brassica rapa HOM05D001683 ORTHO05D001627 1.5e-07 60.1 87 47.1
Cfa023327 Carpinus fangiana HOM05D001683 ORTHO05D001627 1.5e-07 60.1 86 47.7
Lsat_1_v5_gn_3_79441 Lactuca sativa HOM05D001683 ORTHO05D001627 1.5e-07 60.1 90 48.9
Solyc05g009210.2 Solanum lycopersicum HOM05D001683 ORTHO05D001627 1.5e-07 60.1 92 46.7
VMungo0720G2110 Vigna mungo HOM05D001683 ORTHO05D001627 1.5e-07 60.1 54 66.7
CiPaw.03G062600 Carya illinoinensis HOM05D001683 ORTHO05D001627 1.9e-07 59.7 86 52.3
Duzib205G1654 Durio zibethinus HOM05D001683 ORTHO05D001627 1.9e-07 59.7 68 50.0
Glyma.08G366400 Glycine max HOM05D001683 ORTHO05D001627 1.9e-07 59.7 91 41.8
HanXRQChr08g0213621 Helianthus annuus HOM05D001683 ORTHO05D001627 1.9e-07 59.7 88 51.1
Psat3g098320 Pisum sativum HOM05D001683 ORTHO05D001627 1.9e-07 59.7 86 43.0
VMungo0464G0404 Vigna mungo HOM05D001683 ORTHO05D001627 1.9e-07 59.7 109 40.4
GSVIVG01008315001 Vitis vinifera HOM05D001683 ORTHO05D001627 1.9e-07 59.7 86 45.3
MSTRG.2227 Avicennia marina HOM05D001683 ORTHO05D001627 2.5e-07 59.3 88 46.6
Haze_14165 Corylus avellana HOM05D001683 ORTHO05D001627 2.5e-07 59.3 86 47.7
Duzib211G0678 Durio zibethinus HOM05D001683 ORTHO05D001627 2.5e-07 59.3 86 52.3
Lj9C425T13 Lonicera japonica HOM05D001683 ORTHO05D001627 2.5e-07 59.3 85 43.5
Oeu059495.1 Olea europaea HOM05D001683 ORTHO05D001627 2.5e-07 59.3 81 49.4
Peaxi162Scf01445g00123 Petunia axillaris HOM05D001683 ORTHO05D001627 2.5e-07 59.3 89 43.8
Lsat_1_v5_gn_4_154601 Lactuca sativa HOM05D001683 ORTHO05D001627 3.3e-07 58.9 85 45.9
Prupe.3G143400 Prunus persica HOM05D001683 ORTHO05D001627 3.3e-07 58.9 94 39.4
CANSAT78G1410 Cannabis sativa HOM05D001683 ORTHO05D001627 4.3e-07 58.5 91 45.1
Ciclev10012557m.g Citrus clementina HOM05D001683 ORTHO05D001627 4.3e-07 58.5 95 47.4
Duzib084G0144 Durio zibethinus HOM05D001683 ORTHO05D001627 4.3e-07 58.5 77 45.5
Potri.017G115700 Populus trichocarpa HOM05D001683 ORTHO05D001627 4.3e-07 58.5 86 50.0
PGR042G3338 Punica granatum HOM05D001683 ORTHO05D001627 4.3e-07 58.5 86 45.3
Ca_13728_v3 Cicer arietinum L. HOM05D001683 ORTHO05D001627 5.7e-07 58.2 92 45.7
BcaB03g15818 Brassica carinata HOM05D001683 ORTHO05D001627 7.4e-07 57.8 87 44.8
BcaC03g14937 Brassica carinata HOM05D001683 ORTHO05D001627 7.4e-07 57.8 88 48.9
C06p41670 Brassica napus HOM05D001683 ORTHO05D001627 7.4e-07 57.8 87 44.8
BolC2t08547H Brassica oleracea HOM05D001683 ORTHO05D001627 7.4e-07 57.8 88 48.9
BolC6t39259H Brassica oleracea HOM05D001683 ORTHO05D001627 7.4e-07 57.8 87 44.8
Gohir.D07G076300 Gossypium hirsutum HOM05D001683 ORTHO05D001627 7.4e-07 57.8 86 50.0
Gorai.001G081000 Gossypium raimondii HOM05D001683 ORTHO05D001627 7.4e-07 57.8 86 50.0
PSO063G0950 Papaver somniferum HOM05D001683 ORTHO05D001627 9.7e-07 57.4 90 41.1
VMungo1383G1604 Vigna mungo HOM05D001683 ORTHO05D001627 9.7e-07 57.4 88 40.9
A02p14880 Brassica napus HOM05D001683 ORTHO05D001627 1.3e-06 57.0 87 46.0
BraA02t06555Z Brassica rapa HOM05D001683 ORTHO05D001627 1.3e-06 57.0 87 46.0
Cpa.g.sc170.59 Carica papaya HOM05D001683 ORTHO05D001627 1.3e-06 57.0 85 48.2
SGA_v2.0_scaffold115G32107 Striga asiatica HOM05D001683 ORTHO05D001627 1.3e-06 57.0 96 43.8
CARHR093670 Cardamine hirsuta HOM05D001683 ORTHO05D001627 1.6e-06 56.6 82 41.5
Hma1.2p1_0075F.1_g039340 Hydrangea macrophylla HOM05D001683 ORTHO05D001627 1.6e-06 56.6 86 45.3
Thecc.03G037400 Theobroma cacao HOM05D001683 ORTHO05D001627 1.6e-06 56.6 71 47.9
BraA07t31092Z Brassica rapa HOM05D001683 ORTHO05D001627 2.2e-06 56.2 87 43.7
MD17G1245300 Malus domestica HOM05D001683 ORTHO05D001627 2.2e-06 56.2 91 44.0
TWI81G0065 Tripterygium wilfordii HOM05D001683 ORTHO05D001627 2.2e-06 56.2 70 55.7
Gohir.A07G072100 Gossypium hirsutum HOM05D001683 ORTHO05D001627 2.8e-06 55.8 86 48.8
C02p24390 Brassica napus HOM05D001683 ORTHO05D001627 3.7e-06 55.5 88 47.7
PSO170G5495 Papaver somniferum HOM05D001683 ORTHO05D001627 3.7e-06 55.5 92 42.4
Rhsim10G0068100 Rhododendron simsii HOM05D001683 ORTHO05D001627 3.7e-06 55.5 70 51.4
TWI77G0657 Tripterygium wilfordii HOM05D001683 ORTHO05D001627 3.7e-06 55.5 87 44.8
Ah.03g138240 Amaranthus hybridus HOM05D001683 ORTHO05D001627 4.8e-06 55.1 87 43.7
A07p34740 Brassica napus HOM05D001683 ORTHO05D001627 4.8e-06 55.1 87 43.7
Migut.H00223 Erythranthe guttata HOM05D001683 ORTHO05D001627 4.8e-06 55.1 89 41.6
Glyma.13G045300 Glycine max HOM05D001683 ORTHO05D001627 6.3e-06 54.7 87 42.5
HanXRQChr11g0330641 Helianthus annuus HOM05D001683 ORTHO05D001627 6.3e-06 54.7 83 45.8
ATR1125G041 Amborella trichopoda HOM05D001683 ORTHO05D001627 8.2e-06 54.3 86 46.5
Cfa019751 Carpinus fangiana HOM05D001683 ORTHO05D001627 8.2e-06 54.3 82 39.0
Duzib068G0299 Durio zibethinus HOM05D001683 ORTHO05D001627 8.2e-06 54.3 82 43.9
Gohir.D12G267200 Gossypium hirsutum HOM05D001683 ORTHO05D001627 8.2e-06 54.3 71 46.5
Gorai.008G287200 Gossypium raimondii HOM05D001683 ORTHO05D001627 8.2e-06 54.3 71 46.5
Lalb_Chr21g0317791 Lupinus albus HOM05D001683 ORTHO05D001627 8.2e-06 54.3 92 40.2
Sabra17G0095900 Salix brachista HOM05D001683 ORTHO05D001627 8.2e-06 54.3 86 46.5
Sc10g0001100 Simmondsia chinensis HOM05D001683 ORTHO05D001627 8.2e-06 54.3 94 41.5
Sopen02g014300 Solanum pennellii HOM05D001683 ORTHO05D001627 8.2e-06 54.3 88 43.2
TPR.G29083 Trifolium pratense HOM05D001683 ORTHO05D001627 8.2e-06 54.3 86 39.5
VMungo0464G2073 Vigna mungo HOM05D001683 ORTHO05D001627 8.2e-06 54.3 112 37.5
VMungo0720G1057 Vigna mungo HOM05D001683 ORTHO05D001627 8.2e-06 54.3 52 59.6


User provided reference genes

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