Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 2.7e-110 402.1 219 100.0
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 5.1e-77 291.6 222 76.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 5.6e-76 288.1 223 76.7
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.7e-72 276.6 229 73.8
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 3.3e-68 262.3 219 71.2
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 5.8e-65 251.5 225 68.9
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.3e-61 240.4 224 65.6
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.8e-58 229.9 217 65.9
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 9.3e-55 217.6 221 61.5
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 1.2e-54 217.2 224 63.8
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 3.3e-52 209.1 218 58.3
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 3.8e-48 195.7 227 52.0
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 5.0e-48 195.3 228 53.5
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.1e-47 194.1 219 53.0
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.2e-46 190.7 215 58.1
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.3e-45 186.4 221 53.8
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 6.7e-45 184.9 226 49.1
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 6.7e-45 184.9 223 48.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.1e-44 184.1 223 51.1
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.5e-44 183.7 219 52.1
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.5e-44 183.7 219 52.1
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.6e-44 183.0 219 52.1
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.3e-44 182.6 227 51.5
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.3e-44 182.6 226 52.2
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 3.3e-44 182.6 222 50.5
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.4e-44 182.2 224 51.8
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 9.7e-44 181.0 222 50.9
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 9.7e-44 181.0 214 51.4
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 2.8e-43 179.5 233 49.4
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 4.8e-43 178.7 226 49.1
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.1e-42 177.6 217 53.5
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.4e-42 177.2 219 50.2
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.4e-42 177.2 221 51.1
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.8e-42 176.8 226 47.3
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.8e-42 176.8 227 49.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 2.4e-42 176.4 227 48.0
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.1e-42 176.0 245 48.6
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 1.5e-41 173.7 223 50.7
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.0e-41 173.3 220 51.4
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.6e-41 172.9 221 48.4
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.7e-41 171.4 226 49.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.0e-40 171.0 219 50.7
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 2.2e-40 169.9 221 48.9
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.2e-40 169.9 229 49.8
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 5.0e-40 168.7 220 47.3
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 8.5e-40 167.9 222 48.6
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.1e-39 167.5 229 50.2
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.1e-39 167.5 231 45.9
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.9e-39 166.8 231 46.3
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.1e-38 163.3 221 49.8
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 2.7e-38 162.9 222 50.0
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 3.6e-38 162.5 237 49.4
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 7.9e-38 161.4 220 46.4
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.0e-37 161.0 232 49.1
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.0e-37 159.5 225 46.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.9e-37 159.1 221 45.7
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.7e-37 158.3 226 47.8
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 6.7e-37 158.3 157 56.7
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.1e-36 157.5 225 47.6
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.5e-36 157.1 225 48.0
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-36 156.4 227 47.1
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.6e-36 156.4 230 46.5
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.3e-36 156.0 226 46.9
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 7.4e-36 154.8 222 46.4
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.4e-36 154.8 223 47.5
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 9.7e-36 154.5 222 41.4
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.3e-35 154.1 225 48.4
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.3e-35 154.1 219 45.2
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 3.7e-35 152.5 227 47.1
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 8.2e-35 151.4 231 45.0
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 2.4e-34 149.8 224 45.1
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 2.4e-34 149.8 230 44.8
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 7.0e-34 148.3 230 46.1
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 9.1e-34 147.9 219 47.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 9.1e-34 147.9 219 43.4
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.2e-33 147.5 222 46.4
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 4.5e-33 145.6 219 46.1
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.2e-32 143.3 215 44.2
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 2.9e-32 142.9 224 45.1
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 2.9e-32 142.9 176 48.9
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 6.5e-32 141.7 218 45.0
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.5e-31 139.8 268 38.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 9.4e-31 137.9 191 48.7
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.2e-30 137.5 228 43.4
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.2e-30 137.5 223 43.0
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.2e-30 137.5 235 39.1
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.7e-30 135.6 223 41.3
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 6.1e-30 135.2 222 41.4
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 8.0e-30 134.8 237 41.4
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.8e-29 133.7 223 43.9
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 2.3e-29 133.3 230 43.5
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 4.0e-29 132.5 226 43.4
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 5.2e-29 132.1 127 57.5
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 6.7e-29 131.7 166 53.0
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.7e-27 127.1 221 44.3
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 3.5e-25 119.4 143 48.3
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.7e-25 118.2 240 42.5
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.7e-25 118.2 229 38.0
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 2.2e-24 116.7 228 42.1
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.5e-23 114.0 327 32.1
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.5e-23 114.0 229 37.1
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.2e-22 110.9 220 36.4
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-21 107.5 171 42.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 1.4e-21 107.5 222 34.7
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 9.8e-20 101.3 133 48.9
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 7.7e-17 91.7 234 35.0
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 6.5e-16 88.6 123 44.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.9e-15 87.0 118 45.8
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 4.2e-15 85.9 234 32.1
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 3.0e-13 79.7 53 69.8
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.4e-12 76.3 240 29.2
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 1.3e-08 64.3 97 45.4
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 1.1e-07 61.2 94 46.8
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.7e-06 55.8 116 39.7


User provided reference genes

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