Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 3.0e-243 844.7 421 100.0
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 3.0e-195 685.3 421 80.5
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 2.1e-188 662.5 421 78.1
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.5e-186 656.4 422 77.3
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 3.7e-185 651.7 421 77.2
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.0e-182 643.7 421 77.0
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 3.0e-182 642.1 421 77.0
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 7.3e-181 637.5 421 77.0
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 1.7e-177 626.3 412 76.5
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 5.4e-176 621.3 416 75.0
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 8.1e-172 607.4 407 74.4
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 3.2e-168 595.5 430 70.7
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.3e-166 590.1 415 69.4
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.2e-164 583.6 413 70.2
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 3.6e-164 582.0 415 68.9
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 6.2e-164 581.3 413 69.2
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 3.1e-163 578.9 417 67.9
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 4.0e-163 578.6 422 68.0
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 8.9e-163 577.4 415 67.7
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 3.4e-162 575.5 417 68.6
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.4e-162 575.1 414 69.3
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.7e-161 573.2 415 68.4
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 2.2e-161 572.8 421 67.0
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 2.2e-161 572.8 415 68.2
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 2.2e-161 572.8 414 68.4
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 3.8e-161 572.0 421 66.5
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 3.8e-161 572.0 419 66.1
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 1.1e-160 570.5 414 67.4
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.1e-160 570.5 411 67.9
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.5e-159 565.5 416 66.3
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 3.9e-158 562.0 413 67.3
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.1e-157 560.5 424 65.8
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.1e-157 560.5 502 58.0
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 2.5e-157 559.3 415 65.8
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 4.3e-157 558.5 415 66.3
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 2.8e-156 555.8 416 66.6
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 4.0e-155 552.0 419 65.9
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 9.0e-155 550.8 445 64.0
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 2.2e-153 546.2 449 63.3
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 5.4e-152 541.6 409 64.8
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.6e-151 538.5 419 62.5
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.6e-151 538.5 419 62.8
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 4.6e-151 538.5 420 63.3
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 1.0e-150 537.3 375 71.2
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 9.6e-149 530.8 422 62.6
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 9.6e-149 530.8 419 61.8
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 2.1e-148 529.6 423 61.9
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 3.6e-148 528.9 463 59.4
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 6.2e-148 528.1 382 68.1
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 9.0e-147 524.2 414 64.5
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 2.0e-146 523.1 426 62.9
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 5.8e-146 521.5 407 62.7
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 7.6e-146 521.2 486 57.0
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.6e-146 521.2 414 64.3
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 3.8e-145 518.8 405 63.2
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.9e-144 516.5 407 62.9
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.9e-144 516.5 409 62.6
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 1.8e-142 510.0 362 68.5
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.7e-142 508.1 389 63.8
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 9.6e-141 504.2 431 58.5
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.1e-139 500.7 394 63.2
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 3.1e-139 499.2 422 62.8
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 3.8e-137 492.3 407 58.7
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 1.4e-136 490.3 426 58.2
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 1.3e-132 477.2 418 59.1
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 3.4e-130 469.2 417 58.3
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 4.5e-130 468.8 357 65.5
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.8e-130 468.4 330 69.4
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 4.9e-129 465.3 342 66.7
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 7.1e-128 461.5 353 63.7
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 7.9e-127 458.0 450 53.6
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 1.9e-125 453.4 335 66.9
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.0e-121 441.0 475 51.8
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 6.1e-119 431.8 432 52.5
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 2.7e-111 406.4 404 49.8
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 3.6e-111 406.0 400 52.8
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 2.0e-106 390.2 398 49.5
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-103 380.6 286 66.1
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 1.0e-102 377.9 267 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 3.0e-102 376.3 412 47.3
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.1e-99 365.9 279 66.3
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 8.0e-95 351.7 421 43.0
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 1.2e-93 347.8 276 62.7
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 2.0e-93 347.1 277 62.1
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 3.1e-91 339.7 403 44.9
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.0e-89 334.7 416 42.8
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 2.6e-85 320.1 399 43.1
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.3e-81 307.0 232 67.2
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.2e-79 301.2 261 57.5
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.6e-79 300.8 276 55.8
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 2.0e-77 293.9 264 56.8
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 7.0e-75 285.4 544 33.8
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 1.3e-73 281.2 414 37.0
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 4.3e-72 276.2 315 47.0
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 8.0e-71 271.9 415 36.4
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 8.0e-71 271.9 401 36.7
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.0e-70 271.6 441 35.6
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 1.4e-70 271.2 194 67.0
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.4e-69 266.5 425 35.5
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 7.0e-67 258.8 414 35.7
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.8e-62 242.3 189 64.0
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.8e-61 238.4 414 35.0
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 2.3e-54 217.2 152 67.8
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 4.0e-54 216.5 367 36.8
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.2e-54 216.1 415 33.3
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.1e-51 208.4 168 62.5
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.5e-50 203.4 340 34.7
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 3.9e-49 199.9 421 31.4
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 4.4e-45 186.4 353 32.9
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 7.6e-45 185.7 198 53.0
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 7.8e-42 175.6 275 40.7
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 3.9e-41 173.3 382 31.4
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.2e-34 151.8 322 30.4
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 7.8e-34 149.1 118 65.3
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.8e-34 149.1 303 34.0
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.0e-33 148.7 267 37.1
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 6.6e-33 146.0 207 43.5
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.3e-31 141.7 112 63.4
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.2e-31 139.4 114 57.9
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.5e-29 133.3 272 31.2
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 3.2e-27 127.1 95 68.4
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.2e-27 127.1 185 38.9
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 4.2e-27 126.7 95 68.4
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 3.3e-24 117.1 93 63.4
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.4e-24 115.9 144 41.7
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-23 114.8 133 42.9
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.0e-22 110.2 117 47.0
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 2.0e-21 107.8 55 87.3
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.9e-19 101.3 207 30.9
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.5e-19 100.9 227 27.8
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 2.7e-18 97.4 76 65.8
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.6e-16 89.7 104 38.5
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.4e-14 85.1 184 31.5
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.0e-12 79.0 77 46.8
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.4e-11 75.1 80 42.5
SEGI_39271 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 2.3e-09 67.8 82 47.6
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 6.7e-09 66.2 172 30.2
Cre12.g549600 Chlamydomonas reinhardtii HOM05D005467 ORTHO05D006523 4.3e-08 63.5 261 23.4
arahy.Tifrunner.gnm1.ann1.68D7VA Arachis hypogaea HOM05D007334 ORTHO05D011873 6.9e-06 56.2 45 64.4


User provided reference genes

Program Settings