Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 1.8e-243 845.5 430 100.0
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 4.3e-189 664.8 430 79.8
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 7.0e-163 577.8 420 71.4
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 1.2e-157 560.5 429 70.2
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.6e-138 496.9 382 65.7
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 4.3e-136 488.8 385 64.9
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 5.1e-121 438.7 430 57.4
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 7.6e-109 398.3 426 52.1
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 5.4e-107 392.1 421 51.3
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 2.7e-106 389.8 406 51.2
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 6.0e-106 388.7 409 52.3
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 3.0e-105 386.3 409 51.6
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 6.6e-105 385.2 375 55.5
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 8.7e-105 384.8 429 52.7
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 2.8e-103 379.8 421 50.8
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 6.2e-103 378.6 404 51.7
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 1.4e-102 377.5 429 50.8
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 3.4e-101 372.9 411 51.1
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 2.9e-100 369.8 412 50.5
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 3.8e-100 369.4 426 50.7
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 8.4e-100 368.2 421 48.7
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 8.4e-100 368.2 404 49.3
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 8.4e-100 368.2 409 48.4
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 1.6e-98 364.0 425 48.9
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 1.0e-97 361.3 421 49.9
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 1.5e-96 357.5 425 48.7
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 2.5e-96 356.7 414 47.8
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 2.5e-96 356.7 425 48.7
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 2.5e-96 356.7 416 47.8
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 2.5e-96 356.7 421 46.3
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 5.6e-96 355.5 417 47.2
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 2.8e-95 353.2 424 47.4
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 3.7e-95 352.8 424 47.2
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 6.2e-95 352.1 412 47.1
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 1.4e-94 350.9 445 48.1
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 2.4e-94 350.1 447 47.9
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 4.0e-94 349.4 416 47.6
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 4.0e-94 349.4 406 46.6
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 9.0e-94 348.2 424 46.9
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 2.0e-93 347.1 418 46.9
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 2.6e-93 346.7 413 47.2
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 4.5e-93 345.9 421 48.2
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 7.6e-93 345.1 412 48.3
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 2.2e-92 343.6 411 44.0
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 2.2e-92 343.6 419 45.8
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 3.8e-92 342.8 429 48.3
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 2.5e-91 340.1 403 47.9
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 3.2e-91 339.7 371 48.8
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 5.5e-91 339.0 429 45.2
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 1.0e-89 334.7 424 45.0
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 1.3e-89 334.3 412 46.6
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 1.8e-89 334.0 417 47.0
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 1.8e-89 334.0 415 46.7
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 5.1e-89 332.4 403 47.1
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 6.7e-89 332.0 410 45.9
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 1.1e-88 331.3 429 45.7
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 2.5e-88 330.1 410 45.6
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 4.3e-88 329.3 410 45.4
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 3.7e-87 326.2 420 44.3
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 6.2e-87 325.5 405 44.2
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 3.1e-86 323.2 366 45.4
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 1.2e-85 321.2 424 45.0
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 4.5e-85 319.3 445 42.2
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.0e-84 318.2 444 42.3
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.7e-84 317.4 381 45.7
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 2.9e-84 316.6 314 51.6
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 2.9e-84 316.6 443 42.7
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.1e-83 314.7 404 44.6
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 1.9e-83 313.9 418 44.3
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 2.5e-83 313.5 419 43.4
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 1.6e-82 310.8 413 43.8
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 6.7e-81 305.4 405 43.7
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 8.7e-81 305.1 424 42.5
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 9.7e-80 301.6 401 42.9
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 6.3e-79 298.9 419 43.4
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 1.8e-78 297.4 427 43.1
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.4e-78 297.0 272 54.4
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 5.3e-78 295.8 460 42.8
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.5e-77 294.3 363 47.1
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 1.5e-77 294.3 408 42.2
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 2.0e-77 293.9 424 41.3
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 4.5e-77 292.7 401 44.4
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 4.5e-77 292.7 385 46.2
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 6.5e-76 288.9 346 48.8
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 8.5e-76 288.5 401 43.9
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 1.1e-75 288.1 410 43.2
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 2.5e-75 287.0 419 42.2
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 2.5e-75 287.0 349 50.1
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 2.5e-75 287.0 401 42.4
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 4.2e-75 286.2 228 62.7
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 7.2e-75 285.4 409 42.8
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 7.2e-75 285.4 410 42.4
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 1.6e-74 284.3 418 41.9
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 2.1e-74 283.9 405 41.7
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 6.1e-74 282.3 405 42.7
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 6.1e-74 282.3 383 43.6
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 6.1e-74 282.3 408 43.4
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 7.9e-74 282.0 425 41.6
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 1.8e-73 280.8 416 42.5
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 3.3e-72 276.6 416 41.3
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 3.3e-72 276.6 299 48.2
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 1.3e-71 274.6 273 52.0
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 1.4e-70 271.2 400 42.8
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 2.9e-68 263.5 258 50.0
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 7.2e-67 258.8 417 39.8
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 7.2e-67 258.8 319 48.9
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 5.1e-65 252.7 203 59.1
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 6.7e-65 252.3 328 44.2
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 9.7e-64 248.4 361 40.7
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 1.3e-63 248.1 430 39.8
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 6.3e-63 245.7 404 39.1
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 8.2e-63 245.4 261 47.1
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 5.9e-61 239.2 403 36.7
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 7.7e-61 238.8 295 44.1
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 1.0e-60 238.4 295 43.7
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 1.5e-56 224.6 322 39.8
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 8.5e-52 208.8 199 51.3
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 9.4e-51 205.3 297 38.0
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 7.5e-48 195.7 269 46.8
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 2.2e-47 194.1 181 51.4
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 3.7e-47 193.4 316 41.8
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 3.5e-45 186.8 182 48.4
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 5.5e-43 179.5 155 56.8
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 3.8e-36 156.8 249 43.4
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 4.4e-32 143.3 248 42.7
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 9.5e-27 125.6 105 58.1
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 3.4e-24 117.1 100 53.0
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 2.9e-23 114.0 107 50.5
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 3.7e-23 113.6 127 47.2
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 3.2e-22 110.5 107 50.5
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.5e-19 101.7 108 48.1
AUR62033196 Chenopodium quinoa HOM05D005177 ORTHO05D006175 7.3e-19 99.4 98 45.9
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.2e-18 98.6 86 57.0
AUR62037383 Chenopodium quinoa HOM05D005177 ORTHO05D006175 3.6e-18 97.1 105 41.9
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 4.0e-17 93.6 91 52.7
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 2.4e-14 84.3 124 44.4
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.0e-12 79.0 94 48.9
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.7e-12 78.2 85 41.2
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 3.3e-11 73.9 175 43.4
QL01p037253 Quercus lobata HOM05D005177 ORTHO05D033885 4.4e-08 63.5 127 43.3
Phvul.011G073000 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 2.9e-07 60.8 47 53.2
MD02G1245500 Malus domestica HOM05D005177 ORTHO05D006175 5.4e-06 56.6 41 56.1


User provided reference genes

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