Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.2e-62 243.4 171 100.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 8.6e-56 220.7 126 93.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 8.6e-56 220.7 126 92.1
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.1e-55 220.3 125 93.6
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 7.3e-55 217.6 126 88.9
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 4.0e-53 211.8 126 88.1
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 7.6e-52 207.6 120 91.7
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 9.9e-52 207.2 127 88.2
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 2.9e-51 205.7 127 87.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 6.0e-49 198.0 120 85.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.1e-47 193.7 125 82.4
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.2e-46 190.3 127 80.3
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.2e-46 190.3 123 82.1
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.2e-46 190.3 123 82.1
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 4.0e-45 185.3 125 80.8
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 6.8e-45 184.5 122 81.1
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 8.9e-45 184.1 136 75.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.5e-44 183.3 128 78.9
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 2.6e-44 182.6 126 80.2
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 4.4e-44 181.8 128 79.7
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 4.4e-44 181.8 122 80.3
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 7.6e-44 181.0 132 76.5
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 9.9e-44 180.6 125 77.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.3e-43 180.3 126 78.6
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 1.3e-43 180.3 128 75.8
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.7e-43 179.9 131 78.6
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.8e-43 178.7 128 78.1
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 3.8e-43 178.7 123 76.4
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.8e-43 178.7 126 74.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.4e-42 176.0 131 73.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 3.2e-42 175.6 137 73.0
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 5.4e-42 174.9 129 73.6
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 7.1e-42 174.5 122 77.0
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 7.1e-42 174.5 127 78.0
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.2e-41 173.7 132 71.2
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 1.6e-41 173.3 133 72.2
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.1e-41 172.9 124 77.4
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.0e-41 171.4 134 70.9
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 6.0e-41 171.4 126 73.0
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.3e-40 170.2 120 75.0
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.3e-40 169.5 122 74.6
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 5.1e-40 168.3 121 77.7
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 5.1e-40 168.3 113 80.5
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.1e-39 167.2 133 67.7
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.9e-39 166.4 119 79.8
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.9e-39 166.4 131 71.8
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 5.6e-39 164.9 133 66.9
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 1.3e-38 163.7 122 76.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.6e-38 163.3 126 73.0
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.6e-38 163.3 134 72.4
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 8.1e-38 161.0 126 71.4
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 8.1e-38 161.0 126 71.4
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 8.1e-38 161.0 126 71.4
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.1e-37 160.6 185 54.6
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.4e-37 159.5 126 70.6
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 2.4e-37 159.5 126 70.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 3.1e-37 159.1 112 74.1
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.1e-37 159.1 121 72.7
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.0e-37 158.7 124 75.0
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 5.3e-37 158.3 156 62.8
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.9e-37 157.9 134 66.4
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.0e-37 157.5 114 78.9
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 2.0e-36 156.4 130 65.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 2.6e-36 156.0 112 73.2
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 2.6e-36 156.0 112 73.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.4e-36 155.6 113 73.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 3.4e-36 155.6 167 55.1
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 4.4e-36 155.2 130 64.6
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 7.6e-36 154.5 136 64.7
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 7.6e-36 154.5 133 65.4
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 9.9e-36 154.1 134 64.9
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 9.9e-36 154.1 136 67.6
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.7e-35 153.3 131 64.1
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.7e-35 153.3 113 71.7
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.9e-35 152.5 87 92.0
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 8.4e-35 151.0 127 64.6
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 8.4e-35 151.0 130 63.8
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.4e-34 150.2 128 64.8
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.4e-34 150.2 128 64.8
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.4e-34 150.2 128 64.8
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.9e-34 149.8 128 64.1
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.9e-34 149.8 127 67.7
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.9e-34 149.8 111 74.8
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.4e-34 149.4 99 78.8
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.4e-34 149.4 126 65.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.2e-34 149.1 128 64.1
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 9.3e-34 147.5 125 67.2
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.2e-33 147.1 108 77.8
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.1e-33 146.4 124 63.7
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 2.7e-33 146.0 134 61.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.7e-33 146.0 122 63.9
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 2.7e-33 146.0 126 62.7
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.5e-33 145.6 123 63.4
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.0e-33 144.8 112 70.5
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 7.8e-33 144.4 127 66.9
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.3e-32 143.7 128 63.3
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.3e-32 143.7 128 63.3
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.7e-32 143.3 107 72.9
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.7e-32 143.3 124 63.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 3.9e-32 142.1 183 49.7
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 5.1e-32 141.7 124 67.7
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 6.6e-32 141.4 85 83.5
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.3e-31 138.7 125 64.8
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 4.8e-30 135.2 114 68.4
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 6.2e-30 134.8 135 58.5
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.3e-29 131.7 100 73.0
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 6.9e-29 131.3 78 83.3
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 1.5e-28 130.2 96 74.0
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 5.8e-28 128.3 84 78.6
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 5.8e-28 128.3 77 81.8
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 4.9e-27 125.2 99 69.7
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 8.4e-27 124.4 139 56.8
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 8.4e-27 124.4 110 64.5
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.2e-26 122.5 154 50.0
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 4.2e-26 122.1 116 62.9
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.1e-24 115.2 93 69.9
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 2.5e-23 112.8 87 71.3
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 3.3e-23 112.5 248 37.1
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 9.6e-23 110.9 106 57.5
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 4.8e-22 108.6 108 58.3
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 7.6e-20 101.3 90 62.2
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 8.4e-19 97.8 78 66.7
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.9e-17 91.3 89 60.7
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.5e-15 86.3 76 64.5
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 1.4e-13 80.5 81 55.6
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 9.0e-13 77.8 53 81.1
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 9.0e-13 77.8 87 54.0
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.7e-11 73.6 46 84.8
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 4.2e-10 68.9 52 69.2
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 7.4e-07 58.2 67 47.8
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 2.2e-06 56.6 48 58.3
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 8.2e-06 54.7 42 61.9


User provided reference genes

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