Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 0.0e+00 1187.6 721 100.0
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 7.3e-274 947.2 726 84.2
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.1e-273 945.7 722 80.6
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 2.9e-230 802.4 774 72.7
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 5.2e-227 791.6 739 72.0
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 8.6e-206 721.1 808 65.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 8.0e-204 714.5 804 63.4
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 9.8e-194 681.0 805 56.8
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 3.7e-185 652.5 774 59.9
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.9e-168 597.0 730 58.5
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 6.0e-167 592.0 732 59.2
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 4.5e-154 549.3 758 50.7
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 1.7e-153 547.4 746 53.6
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 4.9e-153 545.8 779 54.3
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 9.3e-152 541.6 889 44.8
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 2.7e-151 540.0 887 45.5
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 4.6e-151 539.3 745 51.8
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 1.8e-150 537.3 814 52.5
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 8.1e-148 528.5 793 49.6
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.0e-145 521.5 806 47.9
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.4e-144 517.7 745 51.1
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 4.2e-144 516.2 804 48.9
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 7.9e-143 511.9 790 51.8
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 2.5e-141 506.9 823 46.7
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.3e-140 504.6 790 51.4
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 1.3e-140 504.6 844 48.9
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.8e-140 503.4 766 50.9
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 4.1e-139 499.6 861 46.8
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.9e-137 493.4 787 47.8
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 6.5e-137 492.3 702 52.7
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.4e-136 491.1 816 50.9
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 3.9e-134 483.0 783 47.4
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 6.7e-134 482.3 821 48.4
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 6.7e-134 482.3 818 48.3
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 3.7e-132 476.5 866 47.6
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 1.1e-131 474.9 707 51.2
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.8e-131 474.2 744 48.0
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 6.9e-131 472.2 802 51.5
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.9e-128 464.2 828 40.7
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 3.3e-125 453.4 996 41.6
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 3.4e-122 443.4 764 45.7
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 7.2e-120 435.6 812 44.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.4e-118 431.4 707 51.1
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 1.4e-118 431.4 798 44.2
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 1.8e-118 431.0 739 45.5
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 2.6e-117 427.2 767 48.4
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 9.7e-117 425.2 703 43.2
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 5.5e-112 409.5 691 44.9
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 1.6e-111 407.9 414 57.2
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.6e-111 407.9 766 45.3
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 4.7e-111 406.4 861 40.3
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 2.3e-110 404.1 869 39.6
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 3.0e-110 403.7 385 61.6
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 3.3e-109 400.2 714 48.3
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 5.7e-109 399.4 659 52.5
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 5.7e-109 399.4 808 45.3
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 9.7e-109 398.7 824 42.7
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 2.8e-108 397.1 392 58.2
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.1e-107 395.2 823 44.1
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 3.5e-106 390.2 594 46.8
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 3.5e-106 390.2 805 39.4
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 3.5e-106 390.2 941 36.9
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 3.5e-106 390.2 823 45.0
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.5e-104 384.8 696 43.7
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 2.7e-103 380.6 833 43.1
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 6.1e-103 379.4 714 44.8
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 2.3e-102 377.5 695 42.6
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 6.8e-102 375.9 710 40.3
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 1.1e-99 368.6 763 41.3
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 4.1e-99 366.7 691 43.8
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 2.9e-97 360.5 788 43.4
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 3.8e-97 360.1 435 53.3
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 5.0e-97 359.8 743 44.0
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 5.0e-97 359.8 428 53.3
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 1.5e-96 358.2 745 44.3
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 2.5e-96 357.5 690 41.7
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 4.2e-96 356.7 705 47.5
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 5.7e-93 346.3 679 45.1
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 4.9e-92 343.2 737 42.9
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 6.3e-92 342.8 683 42.0
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 1.1e-91 342.0 779 40.7
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.1e-91 342.0 746 45.2
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.4e-91 341.7 746 39.9
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.1e-91 340.5 685 42.2
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 1.3e-89 335.1 712 44.2
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.3e-89 335.1 711 41.5
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 1.7e-89 334.7 734 44.0
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 5.0e-89 333.2 406 51.7
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 1.9e-88 331.3 411 52.1
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 9.5e-88 328.9 354 56.8
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 8.0e-87 325.9 741 42.4
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 2.3e-86 324.3 704 42.5
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 1.7e-76 291.6 405 45.9
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 2.9e-76 290.8 420 47.1
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 1.0e-73 282.3 815 36.0
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 2.3e-57 228.0 556 45.9
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 5.4e-51 206.8 361 40.4
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 5.4e-51 206.8 361 40.4
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 4.3e-48 197.2 353 42.5
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 3.0e-41 174.5 430 36.7
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 2.0e-37 161.8 182 53.8
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.7e-36 158.7 390 37.7
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.8e-36 157.5 527 43.3
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 6.7e-33 146.7 353 35.7
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.2e-26 125.9 132 55.3
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 2.3e-25 121.7 206 41.3
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.0e-21 108.6 185 41.1
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.0e-21 108.6 326 39.9
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 1.2e-18 99.4 136 49.3
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 3.6e-18 97.8 142 48.6
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 3.3e-16 91.3 94 56.4
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 1.1e-14 86.3 105 50.5
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.4e-14 85.1 108 50.9
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 2.2e-12 78.6 121 44.6
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 3.2e-11 74.7 356 30.9
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 1.1e-08 66.2 347 38.6
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.0e-08 65.5 44 77.3
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 9.7e-08 63.2 47 66.0
Glyma.10G258901 Glycine max HOM05D006481 ORTHO05D008160 2.2e-07 62.0 124 35.5
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 3.7e-07 61.2 35 82.9


User provided reference genes

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