Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 4.1e-122 441.4 228 100.0
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 2.3e-80 302.8 193 83.9
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 8.7e-80 300.8 194 82.0
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 6.9e-77 291.2 194 81.4
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.5e-71 273.5 194 76.3
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 5.7e-71 271.6 195 74.9
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.4e-69 266.9 194 76.3
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 2.4e-69 266.2 194 71.1
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 6.9e-69 264.6 194 70.6
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 3.4e-68 262.3 199 71.4
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 5.9e-68 261.5 191 72.8
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 6.5e-67 258.1 194 70.6
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.0e-56 224.2 190 67.4
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 2.0e-52 209.9 186 63.4
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.2e-51 206.5 193 64.2
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 1.7e-38 163.7 188 60.1
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 6.3e-38 161.8 189 52.9
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 8.6e-35 151.4 185 57.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 2.5e-34 149.8 199 51.8
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 5.5e-34 148.7 196 52.0
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 5.5e-34 148.7 208 48.6
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.1e-33 146.7 196 52.0
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 2.3e-32 143.3 179 49.2
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 6.8e-32 141.7 174 56.3
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 8.9e-32 141.4 190 46.8
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.4e-31 139.0 179 49.7
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 5.7e-31 138.7 236 43.2
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 9.8e-31 137.9 170 47.1
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 9.8e-31 137.9 190 44.7
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 9.8e-31 137.9 190 44.7
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 2.2e-30 136.7 189 46.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.7e-30 136.0 189 44.4
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 8.3e-30 134.8 190 47.9
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.4e-29 133.3 187 46.0
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 2.4e-29 133.3 196 45.4
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 7.0e-29 131.7 196 44.9
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-28 131.0 201 42.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 1.2e-28 131.0 190 45.3
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.6e-28 130.6 199 44.2
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.0e-28 130.2 182 48.4
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.0e-27 127.9 181 45.9
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.0e-27 127.9 190 42.1
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.7e-27 127.1 193 44.0
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.3e-27 126.7 189 43.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 5.0e-27 125.6 182 46.2
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.1e-26 124.4 198 43.4
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.9e-26 123.6 212 39.2
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 7.3e-26 121.7 184 45.7
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.1e-25 120.2 206 42.7
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.6e-25 119.4 147 48.3
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 3.6e-25 119.4 193 44.0
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 6.1e-25 118.6 193 43.5
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 8.0e-25 118.2 193 45.1
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.0e-24 117.9 194 41.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 5.2e-24 115.5 181 45.9
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.5e-23 114.0 199 40.2
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.5e-23 114.0 177 45.2
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 2.6e-23 113.2 190 43.7
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 3.4e-23 112.8 201 43.3
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 4.4e-23 112.5 204 38.7
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 7.5e-23 111.7 180 42.2
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.3e-22 110.9 188 43.1
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.3e-22 110.9 179 42.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.7e-22 110.5 190 40.5
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 2.2e-22 110.2 192 41.7
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.9e-22 109.8 173 45.7
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 4.9e-22 109.0 193 39.9
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 2.4e-21 106.7 195 38.5
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 4.1e-21 105.9 182 44.0
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 5.4e-21 105.5 187 40.6
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.2e-20 104.4 201 37.8
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 3.5e-20 102.8 201 38.3
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 6.0e-20 102.1 194 39.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.3e-19 100.1 203 38.4
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.0e-19 99.8 194 37.6
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.1e-18 97.8 197 37.1
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 2.5e-18 96.7 111 54.1
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 9.5e-18 94.7 198 38.9
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.1e-17 93.6 203 37.9
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 3.6e-17 92.8 188 39.9
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 4.7e-17 92.4 180 42.2
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.1e-16 91.3 189 39.2
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 6.8e-16 88.6 194 37.1
Medtr5g005040 Medicago truncatula HOM05D006273 ORTHO05D007607 2.2e-14 83.6 78 60.3
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 1.4e-13 80.9 214 35.0
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 9.2e-13 78.2 187 35.8
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.2e-12 77.8 171 36.3
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.2e-12 77.8 149 39.6
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.7e-12 76.6 144 36.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 4.6e-12 75.9 191 35.1
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 4.6e-12 75.9 98 52.0
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 4.6e-12 75.9 182 34.1
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 7.8e-12 75.1 185 36.8
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 5.1e-11 72.4 161 41.0
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 6.6e-11 72.0 163 38.0
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 8.6e-11 71.6 195 30.3
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.1e-10 71.2 205 35.6
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.5e-10 70.1 147 36.7
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 1.2e-09 67.8 213 31.5
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 1.2e-09 67.8 203 34.5
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-09 67.8 192 32.3
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.2e-09 67.8 192 32.3
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 2.1e-09 67.0 193 34.7
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 2.8e-09 66.6 161 37.9
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 4.7e-09 65.9 195 34.9
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 6.2e-09 65.5 187 38.0
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.1e-08 64.7 185 31.9
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 1.4e-08 64.3 147 40.1
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.4e-08 64.3 203 35.5
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 5.2e-08 62.4 188 33.5
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 1.5e-07 60.8 192 28.6
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.0e-07 60.5 199 31.7
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 2.6e-07 60.1 198 33.8
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 3.4e-07 59.7 219 31.5
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 2.2e-06 57.0 48 60.4
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 6.4e-06 55.5 126 36.5


User provided reference genes

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