Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10982_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 8.1e-146 520.4 262 100.0
Ca_11002_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 8.1e-146 520.4 262 100.0
TPR.G34503 Trifolium pratense HOM05D003286 ORTHO05D002463 3.9e-31 139.4 262 37.4
Medtr1g105515 Medicago truncatula HOM05D003286 ORTHO05D002463 1.5e-30 137.5 274 34.7
Ca_10980_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 5.6e-30 135.6 248 37.9
Ca_11000_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 5.6e-30 135.6 248 37.9
Glyma.13G153900 Glycine max HOM05D003286 ORTHO05D002463 1.6e-29 134.0 264 35.2
Thecc.06G214200 Theobroma cacao HOM05D003286 ORTHO05D002463 3.6e-29 132.9 265 34.3
Medtr3g080180 Medicago truncatula HOM05D003286 ORTHO05D002463 3.1e-28 129.8 262 34.0
RcHm_v2.0_Chr5g0003951 Rosa chinensis HOM05D003286 ORTHO05D002463 3.1e-28 129.8 269 34.2
VMungo0251G0596 Vigna mungo HOM05D003286 ORTHO05D002463 1.2e-27 127.9 258 33.7
Manes.17G035200 Manihot esculenta HOM05D003286 ORTHO05D002463 1.5e-27 127.5 267 33.0
Phvul.002G250900 Phaseolus vulgaris HOM05D003286 ORTHO05D002463 7.6e-27 125.2 258 32.9
CiPaw.09G087100 Carya illinoinensis HOM05D003286 ORTHO05D002463 1.7e-26 124.0 266 34.2
Duzib235G0679 Durio zibethinus HOM05D003286 ORTHO05D002463 3.7e-26 122.9 263 35.4
Manes.17G035100 Manihot esculenta HOM05D003286 ORTHO05D002463 1.1e-25 121.3 267 32.6
FAN24G2961 Fragaria x ananassa HOM05D003286 ORTHO05D002463 1.4e-25 120.9 262 32.8
Potri.004G022400 Populus trichocarpa HOM05D003286 ORTHO05D002463 1.9e-25 120.6 266 32.3
Manes.16G012200 Manihot esculenta HOM05D003286 ORTHO05D002463 4.1e-25 119.4 260 34.2
FAN15G1751 Fragaria x ananassa HOM05D003286 ORTHO05D002463 5.4e-25 119.0 270 32.2
FvH4_2g19820 Fragaria vesca HOM05D003286 ORTHO05D002463 7.1e-25 118.6 270 32.2
Lj1P1225T26 Lonicera japonica HOM05D003286 ORTHO05D002463 7.1e-25 118.6 286 29.4
Psat5g122680 Pisum sativum HOM05D003286 ORTHO05D002463 7.1e-25 118.6 259 33.6
QL93p0073_0716 Quercus lobata HOM05D003286 ORTHO05D002463 7.1e-25 118.6 266 32.0
Eucgr.E03707 Eucalyptus grandis HOM05D003286 ORTHO05D002463 1.2e-24 117.9 268 31.7
Cc07_g12950 Coffea canephora HOM05D003286 ORTHO05D002463 2.1e-24 117.1 277 32.1
Glyma.U031417 Glycine max HOM05D003286 ORTHO05D002463 2.1e-24 117.1 263 33.5
Cfa000276 Carpinus fangiana HOM05D003286 ORTHO05D002463 6.0e-24 115.5 262 32.1
Prupe.4G026000 Prunus persica HOM05D003286 ORTHO05D002463 7.8e-24 115.2 275 32.0
Sed0004843 Sechium edule HOM05D003286 ORTHO05D002463 5.1e-23 112.5 260 31.2
FAN27G1731 Fragaria x ananassa HOM05D003286 ORTHO05D002463 6.6e-23 112.1 259 32.0
Sabra04G0012200 Salix brachista HOM05D003286 ORTHO05D002463 8.6e-23 111.7 264 31.8
Lj2g0008596 Lotus japonicus HOM05D003286 ORTHO05D002463 1.1e-22 111.3 245 31.8
MBI02_g21870_MAGBIO Magnolia biondii HOM05D003286 ORTHO05D002463 1.5e-22 110.9 256 30.9
Hma1.2p1_0158F.1_g069790 Hydrangea macrophylla HOM05D003286 ORTHO05D002463 1.9e-22 110.5 258 33.7
Ciclev10018056m.g Citrus clementina HOM05D003286 ORTHO05D002463 3.3e-22 109.8 266 33.1
Lalb_Chr10g0101691 Lupinus albus HOM05D003286 ORTHO05D002463 3.3e-22 109.8 278 31.7
Peaxi162Scf00063g00244 Petunia axillaris HOM05D003286 ORTHO05D002463 9.6e-22 108.2 261 34.1
QL05p075142 Quercus lobata HOM05D003286 ORTHO05D002463 1.2e-21 107.8 265 31.3
Psat6g165560 Pisum sativum HOM05D003286 ORTHO05D002463 1.6e-21 107.5 258 32.6
Eucgr.F00162 Eucalyptus grandis HOM05D003286 ORTHO05D002463 2.8e-21 106.7 268 30.2
Oeu009440.1 Olea europaea HOM05D003286 ORTHO05D002463 2.8e-21 106.7 248 33.5
Actinidia01598 Actinidia chinensis HOM05D003286 ORTHO05D002463 3.6e-21 106.3 265 33.2
MD10G1314800 Malus domestica HOM05D003286 ORTHO05D002463 4.7e-21 105.9 271 31.4
Eucgr.D00812 Eucalyptus grandis HOM05D003286 ORTHO05D002463 1.4e-20 104.4 254 31.5
AL6G48830 Arabidopsis lyrata HOM05D003286 ORTHO05D002463 5.2e-20 102.4 245 30.6
Nn1g03635 Nelumbo nucifera HOM05D003286 ORTHO05D002463 8.9e-20 101.7 287 30.3
Solyc11g011900.1 Solanum lycopersicum HOM05D003286 ORTHO05D002463 1.2e-19 101.3 275 30.5
unitig_32.g10728 Utricularia gibba HOM05D003286 ORTHO05D002463 1.2e-19 101.3 259 29.7
VMungo0720G2163 Vigna mungo HOM05D003286 ORTHO05D002463 2.6e-19 100.1 322 28.0
Rhsim10G0183400 Rhododendron simsii HOM05D003286 ORTHO05D002463 4.4e-19 99.4 262 32.4
Migut.K01114 Erythranthe guttata HOM05D003286 ORTHO05D002463 5.8e-19 99.0 269 32.0
AT4G05230 Arabidopsis thaliana HOM05D003286 ORTHO05D002463 7.6e-19 98.6 247 29.6
Gorai.011G016700 Gossypium raimondii HOM05D003286 ORTHO05D002463 7.6e-19 98.6 270 31.1
Thecc.10G122300 Theobroma cacao HOM05D003286 ORTHO05D002463 9.9e-19 98.2 271 28.0
CANSAT56G4121 Cannabis sativa HOM05D003286 ORTHO05D002463 1.3e-18 97.8 287 31.7
FvH4_3g02641 Fragaria vesca HOM05D000218 ORTHO05D000125 1.3e-18 97.8 257 31.5
Gohir.D10G015100 Gossypium hirsutum HOM05D003286 ORTHO05D002463 1.3e-18 97.8 280 28.6
GSVIVG01012631001 Vitis vinifera HOM05D003286 ORTHO05D002463 1.3e-18 97.8 245 30.6
Cpa.g.sc198.10 Carica papaya HOM05D003286 ORTHO05D002463 2.2e-18 97.1 266 30.5
Thhalv10028963m.g Eutrema salsugineum HOM05D003286 ORTHO05D002463 2.2e-18 97.1 249 30.1
Lj1g0012071 Lotus japonicus HOM05D003286 ORTHO05D002463 2.2e-18 97.1 265 29.8
BcaC04g21387 Brassica carinata HOM05D003286 ORTHO05D002463 2.9e-18 96.7 248 29.4
C09p32410 Brassica napus HOM05D003286 ORTHO05D002463 2.9e-18 96.7 248 29.4
BolC9t56086H Brassica oleracea HOM05D003286 ORTHO05D002463 2.9e-18 96.7 248 29.4
Carub.0006s3413 Capsella rubella HOM05D003286 ORTHO05D002463 2.9e-18 96.7 254 29.5
BcaB01g01895 Brassica carinata HOM05D003286 ORTHO05D002463 4.9e-18 95.9 245 29.8
A09p25500 Brassica napus HOM05D003286 ORTHO05D002463 8.4e-18 95.1 249 29.7
BraA09t38125Z Brassica rapa HOM05D003286 ORTHO05D002463 8.4e-18 95.1 249 29.7
EL10Ac4g07788 Beta vulgaris HOM05D003286 ORTHO05D002463 1.1e-17 94.7 291 28.5
Dinv20018 Davidia involucrata HOM05D000218 ORTHO05D000125 1.1e-17 94.7 220 33.6
ECA238G0902 Erigeron canadensis HOM05D003286 ORTHO05D002463 1.1e-17 94.7 268 31.7
Gohir.A10G015100 Gossypium hirsutum HOM05D003286 ORTHO05D002463 1.1e-17 94.7 270 31.1
PGR042G2119 Punica granatum HOM05D003286 ORTHO05D002463 1.1e-17 94.7 258 30.2
Aqoxy1G02958 Aquilegia oxysepala HOM05D003286 ORTHO05D002463 1.4e-17 94.4 284 30.6
DCAR_030615 Daucus carota HOM05D003286 ORTHO05D002463 1.9e-17 94.0 270 28.5
A08p17100 Brassica napus HOM05D003286 ORTHO05D002463 2.4e-17 93.6 245 29.8
Duzib160G0656 Durio zibethinus HOM05D003286 ORTHO05D002463 2.4e-17 93.6 245 29.4
BraA08t33672Z Brassica rapa HOM05D003286 ORTHO05D002463 5.4e-17 92.4 249 28.9
PSO675G8889 Papaver somniferum HOM05D003286 ORTHO05D002463 9.3e-17 91.7 297 30.0
PGR004G2484 Punica granatum HOM05D003286 ORTHO05D002463 9.3e-17 91.7 254 30.7
VMungo0720G2787 Vigna mungo HOM05D003286 ORTHO05D002463 9.3e-17 91.7 296 26.4
PSO541G2565 Papaver somniferum HOM05D003286 ORTHO05D002463 1.2e-16 91.3 298 30.2
Phvul.007G052250 Phaseolus vulgaris HOM05D003286 ORTHO05D002463 1.2e-16 91.3 348 26.7
BcaC01g00928 Brassica carinata HOM05D003286 ORTHO05D002463 1.6e-16 90.9 245 29.4
C03p86020 Brassica napus HOM05D003286 ORTHO05D002463 1.6e-16 90.9 245 29.4
BolC3t20894H Brassica oleracea HOM05D003286 ORTHO05D002463 1.6e-16 90.9 245 29.4
Carub.0006s3317 Capsella rubella HOM05D003286 ORTHO05D002463 1.6e-16 90.9 251 30.3
CsaV3_6G049250 Cucumis sativus L. HOM05D003286 ORTHO05D002463 1.6e-16 90.9 245 30.2
HPP92_012386 Vanilla planifolia HOM05D003286 ORTHO05D002463 2.1e-16 90.5 255 28.2
Nn1g08164 Nelumbo nucifera HOM05D003286 ORTHO05D002463 3.5e-16 89.7 316 27.2
TPR.G5521 Trifolium pratense HOM05D003286 ORTHO05D002463 4.6e-16 89.4 261 29.5
THA.LOC104806256 Tarenaya hassleriana HOM05D003286 ORTHO05D002463 6.0e-16 89.0 245 29.0
TWI38G0444 Tripterygium wilfordii HOM05D003286 ORTHO05D002463 6.0e-16 89.0 255 27.8
CAN.G222.170 Capsicum annuum HOM05D003286 ORTHO05D002463 7.8e-16 88.6 274 29.6
MELO3C007371.2 Cucumis melo HOM05D003286 ORTHO05D002463 7.8e-16 88.6 245 30.2
Gohir.A10G211300 Gossypium hirsutum HOM05D003286 ORTHO05D002463 7.8e-16 88.6 270 28.5
Aa31sc199G10 Aethionema arabicum HOM05D003286 ORTHO05D002463 1.7e-15 87.4 249 28.1
CARHR251320 Cardamine hirsuta HOM05D003286 ORTHO05D002463 1.7e-15 87.4 247 29.1
HPP92_012327 Vanilla planifolia HOM05D003286 ORTHO05D002463 1.7e-15 87.4 258 27.9
Sp6g02990 Schrenkiella parvula HOM05D003286 ORTHO05D002463 3.9e-15 86.3 247 28.3
C02p39730 Brassica napus HOM05D003286 ORTHO05D002463 5.1e-15 85.9 245 28.6
GSVIVG01029957001 Vitis vinifera HOM05D003286 ORTHO05D002463 5.1e-15 85.9 244 30.7
CARHR252330 Cardamine hirsuta HOM05D003286 ORTHO05D002463 6.6e-15 85.5 247 28.3
ClCG01G022170 Citrullus lanatus HOM05D003286 ORTHO05D002463 1.1e-14 84.7 245 28.6
Hund01018 Selenicereus undatus HOM05D003286 ORTHO05D002463 2.5e-14 83.6 253 26.9
HanXRQChr08g0234141 Helianthus annuus HOM05D003286 ORTHO05D002463 1.6e-13 80.9 259 28.6
Lsat_1_v5_gn_8_111880 Lactuca sativa HOM05D003286 ORTHO05D002463 1.6e-13 80.9 297 27.3
Gorai.008G172300 Gossypium raimondii HOM05D007466 ORTHO05D002463 8.1e-13 78.6 251 27.1
Gohir.D12G159200 Gossypium hirsutum HOM05D007466 ORTHO05D002463 1.4e-12 77.8 252 27.0
A05p13150 Brassica napus HOM05D007466 ORTHO05D002463 1.8e-12 77.4 271 27.3
Phvul.007G052300 Phaseolus vulgaris HOM05D003286 ORTHO05D050290 3.1e-12 76.6 169 33.1
Psat6g210240 Pisum sativum HOM05D003286 ORTHO05D002463 3.1e-12 76.6 261 27.6
BolC9t53168H Brassica oleracea HOM05D003286 ORTHO05D002463 4.0e-12 76.3 249 28.1
Ca_16278_v3 Cicer arietinum L. HOM05D000120 ORTHO05D002463 5.3e-12 75.9 193 31.6
Cfa014433 Carpinus fangiana HOM05D007466 ORTHO05D002463 6.9e-12 75.5 254 26.0
MD05G1341200 Malus domestica HOM05D003286 ORTHO05D002463 6.9e-12 75.5 116 39.7
SHI02168 Sapria himalayana HOM05D003286 ORTHO05D002463 6.9e-12 75.5 267 26.6
C04p17280 Brassica napus HOM05D007466 ORTHO05D002463 9.0e-12 75.1 271 27.3
A09p02270 Brassica napus HOM05D003286 ORTHO05D002463 1.2e-11 74.7 249 28.5
C09p02370 Brassica napus HOM05D003286 ORTHO05D002463 1.2e-11 74.7 249 28.5
BraA09t35876Z Brassica rapa HOM05D003286 ORTHO05D002463 1.2e-11 74.7 249 28.5
CSS0032012 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 1.2e-11 74.7 251 24.3
Thhalv10029386m.g Eutrema salsugineum HOM05D003286 ORTHO05D002463 1.2e-11 74.7 233 27.5
Haze_12891 Corylus avellana HOM05D007466 ORTHO05D002463 1.5e-11 74.3 254 26.0
Nn1g07029 Nelumbo nucifera HOM05D007466 ORTHO05D002463 2.6e-11 73.6 251 25.5
Ca_10981_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 4.4e-11 72.8 229 27.9
Ca_11001_v3 Cicer arietinum L. HOM05D003286 ORTHO05D002463 4.4e-11 72.8 229 27.9
QL08p033690 Quercus lobata HOM05D007466 ORTHO05D002463 4.4e-11 72.8 268 25.7
CAN.G921.12 Capsicum annuum HOM05D007466 ORTHO05D002463 9.9e-11 71.6 274 25.5
VMungo0720G0325 Vigna mungo HOM05D003286 ORTHO05D050268 9.9e-11 71.6 340 25.3
MD09G1246300 Malus domestica HOM05D007466 ORTHO05D002463 1.3e-10 71.2 258 25.2
CANSAT64G0630 Cannabis sativa HOM05D007466 ORTHO05D002463 1.7e-10 70.9 264 26.9
HanXRQChr14g0459021 Helianthus annuus HOM05D007466 ORTHO05D002463 1.7e-10 70.9 251 26.7
Phvul.007G052400 Phaseolus vulgaris HOM05D003286 ORTHO05D002463 1.7e-10 70.9 290 25.2
Duzib251G0094 Durio zibethinus HOM05D007466 ORTHO05D002463 2.2e-10 70.5 251 25.5
Solyc07g052500.1 Solanum lycopersicum HOM05D007466 ORTHO05D002463 2.2e-10 70.5 274 26.3
Carub.0004s1370 Capsella rubella HOM05D007466 ORTHO05D002463 3.8e-10 69.7 271 26.9
Cc00_g30040 Coffea canephora HOM05D007466 ORTHO05D002463 3.8e-10 69.7 253 23.7
Phvul.005G113900 Phaseolus vulgaris HOM05D007466 ORTHO05D002463 4.9e-10 69.3 252 24.6
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 6.4e-10 68.9 243 26.3
GSVIVG01030614001 Vitis vinifera HOM05D007466 ORTHO05D002463 6.4e-10 68.9 252 25.4
Ca_01590_v3 Cicer arietinum L. HOM05D007466 ORTHO05D002463 8.4e-10 68.6 253 24.1
COL.COLO4_27678 Corchorus olitorius HOM05D007466 ORTHO05D002463 1.1e-09 68.2 256 24.2
FAN05G5633 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.1e-09 68.2 243 26.7
EL10Ac2g04092 Beta vulgaris HOM05D007466 ORTHO05D002463 1.4e-09 67.8 280 26.1
ClCG02G001800 Citrullus lanatus HOM05D007466 ORTHO05D002463 1.4e-09 67.8 252 25.4
CSS0013854 Camellia sinensis var. sinensis HOM05D003286 ORTHO05D002463 1.9e-09 67.4 80 45.0
MD17G1239100 Malus domestica HOM05D007466 ORTHO05D002463 2.4e-09 67.0 257 25.3
Nitab4.5_0005894g0010 Nicotiana tabacum HOM05D007466 ORTHO05D002463 2.4e-09 67.0 258 25.6
AL6G49560 Arabidopsis lyrata HOM05D003286 ORTHO05D002463 3.2e-09 66.6 262 28.2
CiPaw.04G117300 Carya illinoinensis HOM05D007466 ORTHO05D002463 4.2e-09 66.2 253 25.7
Nitab4.5_0002214g0070 Nicotiana tabacum HOM05D003286 ORTHO05D002463 5.4e-09 65.9 115 35.7
AL6G49970 Arabidopsis lyrata HOM05D003286 ORTHO05D002463 7.1e-09 65.5 261 27.6
MELO3C018805.2 Cucumis melo HOM05D007466 ORTHO05D002463 7.1e-09 65.5 255 23.5
Aqoxy4G01992 Aquilegia oxysepala HOM05D007466 ORTHO05D002463 9.3e-09 65.1 251 24.3
unitig_578.g16773 Utricularia gibba HOM05D007466 ORTHO05D002463 9.3e-09 65.1 269 26.8
Cfa000701 Carpinus fangiana HOM05D003286 ORTHO05D002463 1.6e-08 64.3 71 42.3
COL.COLO4_31727 Corchorus olitorius HOM05D003286 ORTHO05D002463 1.6e-08 64.3 80 42.5
AL6G48890 Arabidopsis lyrata HOM05D003286 ORTHO05D038712 2.1e-08 63.9 256 26.2
Dinv18525 Davidia involucrata HOM05D007466 ORTHO05D002463 2.1e-08 63.9 251 23.9
VMungo0720G0674 Vigna mungo HOM05D003286 ORTHO05D002463 2.1e-08 63.9 188 28.2
unitig_748.g8449 Utricularia gibba HOM05D003286 ORTHO05D002463 2.7e-08 63.5 265 25.7
AT4G03350 Arabidopsis thaliana HOM05D003286 ORTHO05D002463 4.6e-08 62.8 266 28.6
Carub.0006s3408 Capsella rubella HOM05D003286 ORTHO05D002463 4.6e-08 62.8 245 26.5
AT4G03370 Arabidopsis thaliana HOM05D003286 ORTHO05D002463 6.0e-08 62.4 272 25.0
Lsat_1_v5_gn_5_103881 Lactuca sativa HOM05D007466 ORTHO05D002463 7.8e-08 62.0 249 25.3
Manes.13G072500 Manihot esculenta HOM05D007466 ORTHO05D002463 1.0e-07 61.6 261 24.5
Sc07g0002810 Simmondsia chinensis HOM05D003286 ORTHO05D002463 1.0e-07 61.6 115 29.6
CsaV3_7G003740 Cucumis sativus L. HOM05D007466 ORTHO05D002463 1.3e-07 61.2 252 21.0
CARHR252320 Cardamine hirsuta HOM05D003286 ORTHO05D002463 1.7e-07 60.8 253 25.7
Carub.0006s3320 Capsella rubella HOM05D003286 ORTHO05D026808 3.0e-07 60.1 72 43.1
AL6G48840 Arabidopsis lyrata HOM05D003286 ORTHO05D002463 3.9e-07 59.7 64 46.9
AT4G05250 Arabidopsis thaliana HOM05D003286 ORTHO05D002463 3.9e-07 59.7 84 40.5
AUR62020422 Chenopodium quinoa HOM05D003286 ORTHO05D002463 8.7e-07 58.5 83 38.6
TAR624G0130 Trochodendron aralioides HOM05D003286 ORTHO05D002463 1.5e-06 57.8 242 24.4
AUR62015794 Chenopodium quinoa HOM05D003286 ORTHO05D002463 1.9e-06 57.4 174 27.6
TWI36G1433 Tripterygium wilfordii HOM05D007466 ORTHO05D002463 1.9e-06 57.4 251 23.5
TAR624G1349 Trochodendron aralioides HOM05D003286 ORTHO05D002463 1.9e-06 57.4 242 25.2
BolC2t09988H Brassica oleracea HOM05D003286 ORTHO05D002463 2.5e-06 57.0 101 30.7
CSS0024645 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 2.5e-06 57.0 251 22.3
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 5.6e-06 55.8 257 22.6
BolC9t53171H Brassica oleracea HOM05D003286 ORTHO05D020140 7.3e-06 55.5 78 37.2
TAR624G0182 Trochodendron aralioides HOM05D003286 ORTHO05D002463 7.3e-06 55.5 242 24.0
AT4G05240 Arabidopsis thaliana HOM05D003286 ORTHO05D002463 9.6e-06 55.1 61 42.6
C03p37410 Brassica napus HOM05D011698 ORTHO05D013798 9.6e-06 55.1 282 24.1
CARHR251330 Cardamine hirsuta HOM05D003286 ORTHO05D002463 9.6e-06 55.1 299 25.4
CARHR252280 Cardamine hirsuta HOM05D003286 ORTHO05D002463 9.6e-06 55.1 258 24.4
Rhsim06G0158700 Rhododendron simsii HOM05D007466 ORTHO05D002463 9.6e-06 55.1 257 24.5


User provided reference genes

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