Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.8e-191 671.8 344 100.0
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 3.5e-165 585.1 343 84.8
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 2.3e-164 582.4 344 85.2
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 1.1e-147 526.9 340 77.1
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.1e-146 522.7 331 77.3
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 8.1e-146 520.8 330 78.2
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 9.9e-144 513.8 316 80.1
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 2.2e-143 512.7 331 76.4
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.4e-134 483.4 320 74.7
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 1.1e-131 473.8 348 67.2
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 7.4e-131 471.1 346 71.4
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 2.0e-128 463.0 336 68.2
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.2e-127 459.5 346 65.6
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 2.9e-127 459.1 330 68.5
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 8.4e-127 457.6 344 65.1
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 5.5e-126 454.9 338 68.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 9.3e-126 454.1 334 67.7
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.3e-124 450.3 345 65.5
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.9e-124 448.7 335 66.6
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 8.7e-124 447.6 336 67.6
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 1.1e-123 447.2 347 66.0
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.5e-123 446.8 336 67.6
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.5e-123 446.0 333 67.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 9.6e-123 444.1 345 65.5
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.3e-122 443.7 331 67.1
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 3.7e-122 442.2 333 67.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 3.1e-121 439.1 333 67.0
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 4.1e-121 438.7 345 65.2
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 9.0e-121 437.6 338 65.1
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 9.0e-121 437.6 336 65.8
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 2.0e-120 436.4 316 68.7
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 3.4e-120 435.6 341 65.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 5.8e-120 434.9 347 65.7
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 7.6e-120 434.5 335 66.6
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 3.8e-119 432.2 328 67.1
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 6.5e-119 431.4 334 66.2
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 3.2e-118 429.1 331 66.5
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.2e-118 428.7 347 62.2
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 7.2e-118 427.9 317 69.1
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 7.2e-118 427.9 317 69.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 9.3e-118 427.6 349 64.5
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.6e-117 426.8 359 61.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 6.1e-117 424.9 332 65.7
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 6.1e-117 424.9 334 64.1
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.3e-116 423.7 335 68.1
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.3e-116 423.7 335 68.1
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.8e-116 423.3 345 61.7
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.9e-116 422.2 313 71.6
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 8.7e-116 421.0 329 64.4
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.9e-115 419.9 313 69.3
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.9e-115 419.9 335 64.5
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.9e-115 419.9 344 62.8
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 3.7e-114 415.6 351 61.3
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.4e-113 412.9 346 61.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 5.3e-113 411.8 313 65.5
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 5.3e-113 411.8 315 65.4
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 9.0e-113 411.0 313 65.2
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 9.0e-113 411.0 314 65.3
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.2e-112 410.6 336 61.6
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.5e-112 410.2 338 61.5
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 2.0e-112 409.8 332 63.6
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 2.0e-112 409.8 332 63.6
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-112 409.5 314 65.3
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-112 409.5 332 63.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-112 409.5 314 65.3
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.6e-112 409.5 332 63.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 2.6e-112 409.5 314 65.3
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 4.5e-112 408.7 313 65.2
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.5e-112 408.7 334 63.5
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 5.9e-112 408.3 345 61.7
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 1.0e-111 407.5 346 60.7
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 2.2e-111 406.4 320 63.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 3.8e-111 405.6 348 59.2
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.8e-111 405.6 334 60.2
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 5.0e-111 405.2 346 59.5
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 1.1e-110 404.1 335 63.6
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.2e-110 402.5 344 60.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 7.2e-110 401.4 328 61.6
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.6e-109 400.2 320 63.8
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 2.1e-109 399.8 341 62.2
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 2.7e-109 399.4 338 63.0
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 5.1e-108 395.2 338 62.4
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.1e-108 395.2 333 61.9
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 6.7e-108 394.8 319 64.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 4.3e-107 392.1 336 58.9
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.3e-106 390.6 334 60.5
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.8e-105 386.7 343 60.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 5.3e-105 385.2 336 60.1
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 4.5e-104 382.1 343 56.3
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.5e-104 382.1 319 58.3
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 4.5e-104 382.1 319 58.3
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 5.9e-104 381.7 334 57.8
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 7.7e-104 381.3 281 68.3
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 5.0e-103 378.6 338 56.2
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.2e-101 374.0 334 60.5
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 4.7e-101 372.1 319 58.6
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 6.1e-101 371.7 327 57.8
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 7.9e-101 371.3 321 57.9
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.7e-100 368.2 334 60.5
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.6e-99 366.3 335 59.4
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 7.4e-99 364.8 270 68.5
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.1e-97 359.4 343 54.8
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.7e-95 353.6 332 54.8
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.9e-95 352.8 341 54.0
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 3.8e-95 352.4 347 55.9
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.5e-94 350.5 329 56.2
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.9e-94 350.1 313 62.3
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.2e-94 349.4 340 54.1
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 4.7e-93 345.5 332 50.9
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 8.0e-93 344.7 312 58.0
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 9.7e-91 337.8 311 55.9
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.7e-90 337.0 274 64.2
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 1.8e-89 333.6 340 52.4
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.4e-89 333.2 319 54.2
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 9.1e-89 331.3 343 52.5
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.7e-88 329.7 333 50.2
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.9e-88 328.6 325 52.9
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.2e-87 326.6 329 51.1
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.1e-86 324.3 347 50.4
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.1e-86 324.3 251 64.5
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 3.2e-86 322.8 401 47.6
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.5e-86 322.0 334 51.8
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.4e-86 321.2 333 53.5
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 9.4e-86 321.2 315 52.1
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.2e-85 320.9 347 50.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.6e-85 320.5 334 51.8
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 2.1e-85 320.1 348 50.0
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.0e-85 318.2 307 55.7
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.0e-84 317.8 334 51.5
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.8e-84 317.0 328 53.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 8.8e-84 314.7 335 52.2
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.2e-83 314.3 331 50.5
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.5e-83 313.9 328 52.4
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 2.6e-83 313.2 266 57.9
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.7e-82 310.5 335 48.4
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-82 310.5 349 48.7
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 1.7e-82 310.5 349 48.7
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 6.3e-82 308.5 333 47.4
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.3e-82 308.5 339 46.3
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 2.4e-81 306.6 344 50.6
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-80 304.3 340 50.6
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 1.2e-80 304.3 278 58.3
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.0e-79 298.9 299 52.8
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 3.2e-78 296.2 311 50.2
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 8.8e-76 288.1 270 59.6
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 1.8e-73 280.4 162 85.8
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 7.0e-73 278.5 189 69.8
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.5e-72 276.2 207 64.7
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.5e-72 275.8 191 70.2
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.5e-70 270.8 179 70.4
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 2.5e-70 270.0 189 69.8
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 6.1e-69 265.4 189 67.2
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 4.4e-67 259.2 329 45.3
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.6e-64 249.2 189 63.5
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-61 240.7 183 66.1
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.4e-57 227.6 216 55.1
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.3e-55 221.1 190 55.8
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 2.3e-55 220.3 311 39.2
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.0e-55 219.2 185 61.1
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 9.5e-54 214.9 242 47.1
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 2.1e-48 197.2 228 53.9
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.6e-45 187.6 326 39.6
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 5.8e-35 152.5 165 50.9
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-32 144.8 172 47.1
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 4.6e-32 142.9 168 48.2
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 1.6e-29 134.4 104 67.3
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 4.8e-29 132.9 89 70.8
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 4.5e-27 126.3 92 65.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 5.8e-27 125.9 335 30.1
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 2.1e-24 117.5 95 61.1
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 5.1e-23 112.8 77 70.1
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 1.9e-22 110.9 81 60.5
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 2.1e-21 107.5 80 60.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 6.2e-21 105.9 76 64.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 8.7e-15 85.5 75 61.3
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 4.8e-13 79.7 48 77.1
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 8.1e-13 79.0 67 61.2
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.2e-11 75.1 54 64.8
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 3.8e-10 70.1 57 59.6
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.9e-09 67.8 74 52.7


User provided reference genes

Program Settings