Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10843_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.5e-75 286.2 149 100.0
Ca_10844_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.5e-75 286.2 149 100.0
Ca_29759_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 5.5e-75 284.3 149 99.3
Ca_10845_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 2.7e-74 282.0 149 99.3
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 3.6e-74 281.6 148 99.3
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 7.0e-70 267.3 148 91.9
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 1.2e-69 266.5 148 91.2
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 1.6e-69 266.2 148 89.9
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 2.0e-69 265.8 148 89.9
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 3.5e-69 265.0 148 91.9
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 5.0e-68 261.2 148 85.8
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 1.5e-67 259.6 148 88.5
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 2.5e-67 258.8 148 84.5
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 2.8e-66 255.4 148 88.5
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 1.5e-59 233.0 148 83.1
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 2.8e-58 228.8 148 79.7
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 3.0e-52 208.8 148 69.6
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 3.3e-51 205.3 148 67.6
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 1.6e-50 203.0 148 68.9
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 1.6e-50 203.0 148 68.9
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 1.1e-49 200.3 148 70.3
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 3.1e-49 198.7 148 66.9
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 5.2e-49 198.0 148 66.9
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 3.4e-48 195.3 148 66.2
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 3.4e-48 195.3 148 66.2
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 1.7e-47 193.0 148 63.5
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 2.2e-47 192.6 148 64.9
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 4.9e-47 191.4 148 66.2
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 6.4e-47 191.0 148 63.5
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 8.3e-47 190.7 148 65.5
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 8.3e-47 190.7 148 65.5
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.1e-46 190.3 148 64.9
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 1.4e-46 189.9 148 64.9
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 1.9e-46 189.5 148 62.8
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 3.2e-46 188.7 147 66.7
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 3.5e-45 185.3 148 65.5
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.0e-44 183.7 148 64.2
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 1.3e-44 183.3 148 62.8
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 2.3e-44 182.6 148 63.5
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 2.3e-44 182.6 149 61.7
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 3.0e-44 182.2 147 64.6
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 3.0e-44 182.2 147 64.6
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 3.9e-44 181.8 147 64.6
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 6.6e-44 181.0 149 59.7
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 1.1e-43 180.3 148 64.2
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.5e-43 179.9 148 62.8
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 1.9e-43 179.5 148 62.8
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 1.9e-43 179.5 148 64.2
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 2.1e-42 176.0 148 58.1
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 2.8e-42 175.6 148 60.8
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 2.8e-42 175.6 148 58.1
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 2.3e-41 172.6 147 62.6
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 3.1e-41 172.2 147 57.1
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 1.2e-40 170.2 148 58.1
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 2.6e-40 169.1 147 55.8
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 7.5e-40 167.5 148 58.1
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 2.2e-39 166.0 148 56.1
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 2.9e-39 165.6 148 56.1
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 6.4e-39 164.5 148 60.8
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 1.1e-38 163.7 148 56.1
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 1.1e-38 163.7 148 54.1
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 1.4e-38 163.3 171 50.9
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 3.2e-38 162.2 148 55.4
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 5.1e-36 154.8 144 51.4
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 8.6e-36 154.1 148 51.4
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 1.1e-35 153.7 148 50.7
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 1.1e-35 153.7 148 50.7
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 2.5e-35 152.5 148 52.7
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 5.6e-35 151.4 148 50.7
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 5.6e-35 151.4 148 50.7
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 7.3e-35 151.0 148 53.4
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 1.6e-34 149.8 148 52.7
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 1.6e-34 149.8 148 49.3
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 2.1e-34 149.4 147 49.0
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 2.8e-34 149.1 148 50.0
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 3.6e-34 148.7 148 50.0
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 8.1e-34 147.5 148 49.3
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 8.1e-34 147.5 148 49.3
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 8.1e-34 147.5 148 49.3
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 8.1e-34 147.5 148 52.0
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.4e-33 146.7 148 50.7
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 3.1e-33 145.6 148 48.6
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 3.1e-33 145.6 148 48.6
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 4.0e-33 145.2 148 52.0
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 8.9e-33 144.1 127 61.4
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 7.6e-32 141.0 148 53.4
SalBow5G3991 Salvia bowleyana HOM05D005582 ORTHO05D007028 9.9e-32 140.6 148 50.7
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 1.3e-31 140.2 148 52.7
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 1.3e-31 140.2 148 52.7
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 2.9e-31 139.0 148 48.0
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 3.8e-31 138.7 148 50.7
CDE02G3337 Ceratophyllum demersum HOM05D005582 ORTHO05D007028 4.9e-31 138.3 148 48.6
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 3.2e-30 135.6 148 50.0
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 7.1e-30 134.4 154 51.3
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 3.5e-29 132.1 148 49.3
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 1.0e-28 130.6 148 46.6
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 8.7e-28 127.5 148 47.3
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 2.1e-26 122.9 148 45.3
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 6.9e-25 117.9 148 48.0
SEGI_37408 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 6.6e-20 101.3 157 35.7
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 5.8e-16 88.2 148 31.8
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 7.6e-16 87.8 133 34.6
CAN.G484.83 Capsicum annuum HOM05D005582 ORTHO05D007028 1.8e-12 76.6 79 53.2
Rhsim03G0109500 Rhododendron simsii HOM05D005582 ORTHO05D004029 2.4e-09 66.2 60 58.3


User provided reference genes

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