Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.4e-118 429.5 200 100.0
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 9.7e-83 310.5 225 68.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.0e-80 302.8 219 68.9
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 6.1e-77 291.2 224 65.2
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.0e-76 288.9 218 66.5
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 3.0e-76 288.9 225 64.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 5.1e-76 288.1 218 65.6
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.4e-73 279.3 227 64.8
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 9.4e-70 267.3 220 61.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.0e-68 263.8 202 62.9
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.0e-68 263.8 202 62.9
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.3e-68 262.7 217 57.6
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 8.8e-68 260.8 225 58.7
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 8.8e-68 260.8 183 68.9
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 8.8e-68 260.8 183 68.9
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.0e-67 259.6 220 59.5
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 2.6e-67 259.2 215 60.9
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 2.6e-67 259.2 222 60.8
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 3.3e-67 258.8 223 58.3
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 5.7e-67 258.1 225 58.2
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.3e-66 256.9 219 57.1
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.3e-66 256.9 215 60.9
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.8e-66 255.8 219 56.6
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 4.8e-66 255.0 220 56.4
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.8e-66 255.0 202 61.4
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 6.3e-66 254.6 222 57.7
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 8.2e-66 254.2 219 56.2
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 8.2e-66 254.2 219 57.1
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.1e-65 253.8 223 57.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.4e-65 253.4 223 57.8
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.8e-65 253.1 220 56.8
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.8e-65 253.1 215 60.5
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 2.4e-65 252.7 218 58.7
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 4.1e-65 251.9 225 54.7
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 4.1e-65 251.9 224 55.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 9.1e-65 250.8 216 56.5
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 9.1e-65 250.8 216 56.5
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.2e-64 250.4 218 56.0
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.2e-64 250.4 222 56.8
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.5e-64 248.8 217 57.6
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 3.5e-64 248.8 214 58.4
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 4.5e-64 248.4 217 57.1
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 4.5e-64 248.4 238 55.0
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 4.5e-64 248.4 223 57.0
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 4.5e-64 248.4 219 56.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 7.7e-64 247.7 219 57.1
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 1.3e-63 246.9 218 56.9
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.7e-63 246.5 220 57.7
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.7e-63 246.5 214 57.5
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.7e-63 246.5 221 55.2
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 2.9e-63 245.7 222 56.3
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 2.9e-63 245.7 222 56.3
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 3.8e-63 245.4 222 56.8
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.8e-63 245.4 221 55.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.8e-63 245.4 215 56.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.8e-63 245.4 218 57.3
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 8.5e-63 244.2 220 54.1
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.5e-62 242.7 217 57.1
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 3.2e-62 242.3 207 57.5
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.2e-62 242.3 173 67.1
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 4.2e-62 241.9 217 55.3
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 5.5e-62 241.5 218 56.4
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 7.2e-62 241.1 216 56.0
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 9.4e-62 240.7 220 56.8
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.1e-61 239.6 219 56.2
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 3.6e-61 238.8 224 56.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.6e-61 238.8 181 60.8
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 6.1e-61 238.0 212 55.2
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.1e-61 238.0 238 51.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 8.0e-61 237.7 224 55.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.0e-60 237.3 224 54.5
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.4e-60 236.9 219 56.6
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.0e-60 235.3 216 56.0
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 6.7e-60 234.6 221 53.4
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.3e-59 232.3 182 62.1
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 4.4e-59 231.9 217 55.8
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.7e-59 231.5 139 76.3
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 7.5e-59 231.1 267 47.2
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 7.5e-59 231.1 183 60.1
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 9.7e-59 230.7 228 53.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.7e-58 229.9 185 61.1
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.8e-58 228.4 185 60.5
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 6.3e-58 228.0 184 62.5
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-57 226.9 220 53.2
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-57 226.9 220 53.2
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.4e-57 226.9 213 51.6
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.8e-57 226.5 210 57.1
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 2.4e-57 226.1 217 53.5
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 3.1e-57 225.7 180 59.4
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 3.1e-57 225.7 180 61.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 7.0e-57 224.6 183 60.7
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.2e-56 223.8 179 58.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.2e-56 223.8 182 60.4
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.6e-56 223.4 182 60.4
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 2.0e-56 223.0 179 60.3
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.7e-56 222.6 186 61.3
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 3.5e-56 222.2 223 51.1
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.9e-56 221.5 180 60.0
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.7e-56 221.1 234 49.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.8e-55 218.8 226 49.6
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.1e-54 217.2 161 63.4
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.2e-54 215.3 221 50.2
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.2e-53 213.8 183 56.8
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 3.6e-53 212.2 181 58.6
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 5.7e-51 204.9 265 44.9
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.3e-50 203.8 187 54.0
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.2e-50 203.0 181 56.9
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 3.7e-50 202.2 182 55.5
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.0e-48 196.4 208 47.1
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.7e-47 193.4 125 68.8
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 5.5e-46 188.3 187 49.7
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.2e-42 176.4 200 48.5
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 9.5e-38 161.0 90 72.2
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 6.1e-37 158.3 186 44.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 6.4e-34 148.3 214 35.5
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.4e-33 147.1 72 77.8
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.5e-08 62.8 61 39.3


User provided reference genes

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