Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 0.0e+00 1135.6 666 100.0
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 4.5e-193 678.7 692 62.7
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.8e-186 656.8 677 60.7
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 5.0e-168 595.5 681 58.6
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 7.0e-154 548.5 700 51.7
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 6.6e-152 542.0 726 51.5
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 1.5e-151 540.8 722 51.4
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 6.0e-137 492.3 635 52.0
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 3.3e-135 486.5 701 48.9
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 3.4e-132 476.5 709 48.8
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 6.2e-126 455.7 727 50.1
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 6.6e-120 435.6 718 45.8
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.6e-116 423.7 735 45.6
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 2.9e-115 420.2 690 48.1
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 2.9e-115 420.2 748 46.4
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 1.3e-112 411.4 730 44.7
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 3.0e-112 410.2 741 44.9
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 7.1e-106 389.0 641 47.4
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 5.3e-93 346.3 739 41.3
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 2.5e-90 337.4 709 40.3
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 3.2e-82 310.5 754 37.8
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 2.1e-81 307.8 747 38.4
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 3.0e-80 303.9 753 37.8
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 5.1e-80 303.1 709 39.2
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 8.8e-80 302.4 747 38.4
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 2.6e-79 300.8 735 36.7
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 4.8e-78 296.6 736 37.5
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 6.5e-75 286.2 741 37.0
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 2.7e-73 280.8 749 37.1
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.6e-71 274.2 750 36.1
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 7.4e-71 272.7 738 36.9
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 3.7e-70 270.4 776 36.7
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 6.3e-70 269.6 706 35.7
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 6.3e-70 269.6 706 36.7
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 6.3e-70 269.6 706 35.7
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 6.3e-70 269.6 712 37.6
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.4e-69 268.5 706 35.6
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 4.1e-69 266.9 764 38.9
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 5.3e-69 266.5 709 36.2
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 2.6e-68 264.2 729 37.7
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 3.5e-68 263.8 742 34.8
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 4.5e-68 263.5 702 36.6
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.0e-67 262.3 705 35.9
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.2e-67 261.2 736 35.6
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 6.1e-65 253.1 730 36.0
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 1.8e-64 251.5 711 35.0
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 3.3e-63 247.3 748 34.0
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 5.7e-63 246.5 729 34.2
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 9.7e-63 245.7 722 35.3
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 9.7e-63 245.7 671 36.1
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 4.8e-62 243.4 619 38.1
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.4e-61 241.9 606 37.6
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 5.3e-61 240.0 754 34.5
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 9.1e-61 239.2 797 32.9
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 9.1e-61 239.2 752 33.0
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.6e-60 238.4 763 32.9
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 8.5e-59 232.6 710 34.2
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 7.2e-58 229.6 709 33.7
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 6.1e-57 226.5 753 32.8
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.8e-56 222.6 728 32.7
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 5.7e-55 219.9 776 31.1
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 9.8e-55 219.2 749 31.6
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 9.8e-55 219.2 704 33.2
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.7e-54 218.4 685 33.6
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 1.7e-54 218.4 284 52.8
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 3.7e-54 217.2 713 36.9
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 4.8e-54 216.9 740 31.9
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 4.1e-53 213.8 786 32.7
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 7.0e-53 213.0 772 36.8
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 5.9e-52 209.9 695 32.7
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 7.7e-52 209.5 702 33.3
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 3.8e-51 207.2 483 38.9
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 8.6e-51 206.1 750 31.6
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.9e-50 204.9 698 35.5
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 5.5e-50 203.4 704 35.1
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 9.5e-50 202.6 698 32.2
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 8.0e-49 199.5 750 32.5
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.3e-48 198.0 680 30.7
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 1.5e-47 195.3 723 35.1
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 2.4e-45 188.0 671 31.7
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.4e-45 188.0 802 33.2
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 7.0e-45 186.4 759 31.0
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 7.0e-45 186.4 761 32.1
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 1.6e-44 185.3 618 33.7
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 3.5e-44 184.1 595 36.3
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.8e-40 171.8 376 41.5
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 2.3e-40 171.4 742 28.7
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 3.1e-40 171.0 717 30.0
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 6.8e-40 169.9 676 31.2
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 2.6e-39 167.9 671 30.1
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 3.4e-39 167.5 775 35.4
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 4.4e-39 167.2 676 30.5
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 4.4e-39 167.2 727 28.9
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 7.5e-39 166.4 688 29.7
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 9.8e-39 166.0 718 30.1
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 1.7e-38 165.2 701 31.8
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 4.9e-38 163.7 690 30.4
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 2.4e-37 161.4 715 28.7
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 7.0e-37 159.8 689 30.9
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 5.0e-35 153.7 699 29.8
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 6.6e-35 153.3 696 28.7
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.9e-34 151.8 682 29.0
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.5e-34 151.4 752 29.5
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 4.3e-34 150.6 598 30.9
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 9.5e-34 149.4 681 29.5
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.6e-33 148.7 783 28.1
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 4.7e-33 147.1 692 29.3
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 3.1e-32 144.4 728 30.4
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 8.9e-32 142.9 662 31.9
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.5e-31 142.1 722 31.6
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 3.4e-31 141.0 704 28.4
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 4.4e-31 140.6 706 31.2
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 5.8e-31 140.2 600 29.5
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 7.5e-31 139.8 653 29.6
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 9.8e-31 139.4 736 29.6
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 9.8e-31 139.4 702 29.6
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 6.4e-30 136.7 721 30.0
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 6.4e-30 136.7 726 28.2
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 4.1e-29 134.0 601 29.5
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.4e-29 133.7 665 25.9
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 4.6e-28 130.6 736 29.3
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 4.6e-28 130.6 667 28.6
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 6.0e-28 130.2 671 31.3
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 3.9e-27 127.5 238 40.3
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 2.5e-26 124.8 722 26.6
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 4.3e-26 124.0 281 37.4
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.6e-26 123.6 701 27.0
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 9.5e-26 122.9 655 26.9
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 8.9e-24 116.3 175 47.4
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 4.4e-23 114.0 638 29.8
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 9.9e-23 112.8 344 32.8
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.2e-22 111.7 643 27.4
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.4e-21 109.0 650 26.5
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 3.2e-21 107.8 349 32.4
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.9e-18 98.6 346 30.3
VMungo0720G0588 Vigna mungo HOM05D003765 ORTHO05D004561 2.5e-18 98.2 191 37.2
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 1.2e-17 95.9 177 38.4
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 1.1e-16 92.8 542 30.1
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 1.8e-16 92.0 223 36.3
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 1.8e-16 92.0 176 35.8
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 4.0e-16 90.9 279 31.9
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 6.8e-16 90.1 289 32.9
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.5e-15 89.0 202 40.6
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 3.4e-15 87.8 101 58.4
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 4.4e-15 87.4 101 58.4
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 5.8e-15 87.0 307 31.3
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 9.9e-15 86.3 259 35.1
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 2.2e-14 85.1 350 30.0
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 2.9e-14 84.7 352 29.5
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 2.9e-14 84.7 352 29.5
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 1.1e-13 82.8 350 29.7
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.1e-13 82.8 344 30.5
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.1e-13 82.8 355 29.3
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 5.4e-13 80.5 345 30.7
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 7.1e-13 80.1 354 30.5
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 7.1e-13 80.1 300 29.7
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 9.2e-13 79.7 344 28.5
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 9.2e-13 79.7 136 37.5
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 1.6e-12 79.0 344 29.1
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 2.1e-12 78.6 345 30.4
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 7.8e-12 76.6 378 29.9
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 1.7e-11 75.5 346 28.0
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 3.0e-11 74.7 341 28.7
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 1.5e-10 72.4 645 24.8
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 2.5e-10 71.6 359 28.1
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 7.3e-10 70.1 244 32.0
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 9.6e-10 69.7 153 35.9
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.2e-09 69.3 123 35.0
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.2e-09 69.3 124 36.3
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 3.6e-09 67.8 246 32.9
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 6.2e-09 67.0 289 28.4
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-08 65.9 340 27.1
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-08 65.9 340 27.1
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 4.0e-08 64.3 172 36.0
Duzib205G0479 Durio zibethinus HOM05D003765 ORTHO05D004561 1.5e-07 62.4 90 40.0
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.3e-06 59.3 813 24.2


User provided reference genes

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