Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 4.0e-257 891.0 461 100.0
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 7.9e-221 770.4 461 85.7
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 4.3e-219 764.6 461 85.7
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 4.8e-210 734.6 461 81.1
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.8e-202 708.8 465 77.8
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 3.6e-197 691.8 467 76.7
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 4.6e-197 691.4 470 77.0
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.1e-190 670.2 443 79.5
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 6.1e-181 637.9 469 71.9
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 6.4e-154 548.1 405 71.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 7.0e-153 544.7 441 66.7
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.9e-150 536.6 471 60.3
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 5.4e-145 518.5 471 60.3
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 6.6e-143 511.5 466 57.9
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 2.1e-141 506.5 467 58.5
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 8.1e-141 504.6 473 56.2
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.5e-139 500.4 476 56.9
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 5.8e-139 498.4 473 56.7
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 4.9e-138 495.4 469 56.3
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 2.7e-136 489.6 467 55.9
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 3.5e-136 489.2 471 56.7
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.7e-135 486.9 465 54.4
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 7.3e-134 481.5 467 57.4
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.6e-133 480.3 470 53.8
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 8.9e-132 474.6 469 55.4
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.6e-131 473.0 471 53.5
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.4e-131 472.6 480 53.3
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.7e-130 470.3 467 53.1
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.1e-129 467.6 471 52.2
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 5.4e-129 465.3 471 55.2
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 2.7e-128 463.0 471 55.0
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.5e-126 457.2 477 54.3
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.3e-126 455.7 472 51.5
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 7.3e-126 454.9 468 53.2
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.8e-125 453.0 475 53.7
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.7e-125 452.2 477 53.9
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.4e-124 450.7 464 52.4
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 3.1e-124 449.5 470 50.9
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 3.1e-124 449.5 468 52.6
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 4.0e-124 449.1 469 53.1
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.4e-123 446.0 470 52.6
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 3.4e-123 446.0 466 53.0
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 4.4e-123 445.7 467 51.4
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 3.8e-122 442.6 469 52.7
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 4.9e-122 442.2 468 52.8
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 4.9e-122 442.2 433 52.9
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 6.4e-122 441.8 468 53.4
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.9e-121 440.3 469 53.7
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 5.4e-121 438.7 462 51.5
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 9.3e-121 438.0 468 51.7
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 1.6e-120 437.2 467 53.3
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 1.6e-120 437.2 467 53.3
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 1.6e-120 437.2 467 53.3
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 6.0e-120 435.3 467 51.4
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 3.0e-119 433.0 470 51.9
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 6.6e-119 431.8 470 49.4
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 1.1e-118 431.0 472 49.8
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 3.3e-118 429.5 467 52.5
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 5.6e-118 428.7 467 52.7
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 2.1e-117 426.8 461 50.8
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 2.8e-117 426.4 463 50.8
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 4.8e-117 425.6 461 49.9
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 8.1e-117 424.9 463 51.0
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 8.1e-117 424.9 476 52.5
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 1.4e-116 424.1 407 55.8
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 9.0e-116 421.4 409 56.0
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.4e-115 419.5 441 54.4
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 8.4e-114 414.8 467 48.4
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 4.2e-113 412.5 409 53.5
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 7.9e-112 408.3 471 48.8
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 3.9e-111 406.0 468 48.7
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 9.6e-110 401.4 357 60.5
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.6e-109 400.6 467 48.4
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 8.1e-109 398.3 444 51.8
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 8.1e-109 398.3 466 48.1
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 3.1e-108 396.4 466 47.6
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 1.2e-107 394.4 467 47.3
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 2.6e-107 393.3 456 48.0
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 9.3e-105 384.8 424 50.9
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 7.9e-104 381.7 402 50.7
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.3e-103 380.9 458 45.0
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 6.7e-103 378.6 409 52.3
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 7.4e-102 375.2 464 44.0
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.4e-100 370.9 472 45.3
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 6.3e-93 345.5 377 49.1
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 8.2e-85 318.5 594 35.2
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.8e-82 309.7 362 49.7
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.4e-79 301.2 473 41.4
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 9.7e-78 295.0 440 42.0
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 7.9e-72 275.4 239 59.8
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 9.7e-70 268.5 239 56.1
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 6.3e-69 265.8 338 48.5
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 2.3e-63 247.3 263 49.8
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 1.1e-60 238.4 528 30.9
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 3.1e-60 236.9 255 47.5
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 9.1e-60 235.3 259 54.4
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.6e-59 234.6 456 36.6
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 7.5e-46 189.1 144 68.1
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 9.8e-46 188.7 391 37.3
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 5.9e-43 179.5 183 57.4
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.0e-42 178.7 469 27.5
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.5e-41 174.9 455 32.3
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 2.1e-40 171.0 319 34.8
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 4.9e-37 159.8 523 26.6
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.4e-36 158.3 204 48.0
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 5.6e-33 146.4 466 29.6
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 6.2e-32 142.9 123 60.2
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 8.9e-31 139.0 454 29.7
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 2.2e-21 107.8 132 48.5
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.3e-18 97.8 111 55.0
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 3.0e-18 97.4 114 49.1
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 8.6e-18 95.9 143 42.7
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 2.5e-17 94.4 172 35.5
VMungo0331G1316 Vigna mungo HOM05D006594 ORTHO05D008383 1.4e-15 88.6 81 56.8
VMungo1215G2423 Vigna mungo HOM05D006594 ORTHO05D008383 1.4e-15 88.6 184 35.9
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 6.8e-15 86.3 113 38.9
VMungo1215G0888 Vigna mungo HOM05D006594 ORTHO05D008383 9.9e-14 82.4 57 66.7
arahy.Tifrunner.gnm1.ann1.0F3SR2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.2e-08 65.5 51 62.7
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.1e-07 62.4 124 26.6


User provided reference genes

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