Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 0.0e+00 1293.5 694 100.0
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 2.1e-281 972.2 701 77.5
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 2.6e-276 955.3 707 75.1
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 4.8e-254 881.3 717 69.9
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.3e-232 810.1 717 64.7
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 7.4e-231 804.3 713 63.8
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.0e-227 793.9 710 63.8
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-221 773.9 713 61.0
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.5e-220 770.0 717 61.4
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.0e-220 769.6 712 60.7
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 1.0e-195 687.6 711 57.7
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.8e-193 679.5 716 55.0
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 5.4e-189 665.2 718 54.7
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.0e-184 649.4 717 53.8
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.8e-176 623.6 792 50.6
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.8e-168 597.0 713 49.9
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.9e-166 589.7 640 54.5
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.9e-165 587.0 718 49.7
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 5.4e-165 585.5 718 50.0
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 6.6e-163 578.6 723 50.3
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 3.8e-158 562.8 734 48.6
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.9e-157 560.5 711 49.1
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 3.3e-154 549.7 730 47.1
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 3.3e-154 549.7 720 49.3
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.1e-152 544.7 728 47.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 2.0e-151 540.4 723 47.3
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.6e-151 538.5 726 47.4
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 7.6e-151 538.5 737 45.9
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 3.8e-150 536.2 735 46.7
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.1e-149 534.6 730 46.3
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.9e-149 533.9 730 46.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.9e-149 533.9 731 47.5
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 7.1e-149 531.9 729 47.6
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 2.7e-148 530.0 725 46.8
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 7.8e-148 528.5 736 46.5
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 2.3e-147 526.9 663 49.0
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.7e-147 525.0 739 46.7
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 4.3e-146 522.7 733 46.0
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.1e-144 516.5 711 47.0
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 5.3e-144 515.8 733 46.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 9.0e-144 515.0 727 45.3
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.2e-143 514.6 730 46.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.2e-143 514.6 731 45.3
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-143 514.2 721 46.5
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.4e-143 513.1 728 45.7
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 7.6e-143 511.9 736 46.6
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.3e-139 501.1 711 46.4
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 4.3e-138 496.1 732 44.7
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.3e-138 496.1 716 45.4
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 4.3e-138 496.1 743 46.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 4.3e-138 496.1 576 52.3
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.3e-137 494.6 715 45.5
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 6.2e-137 492.3 709 44.4
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.0e-135 487.3 736 45.5
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 3.4e-135 486.5 841 41.6
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 4.5e-135 486.1 717 45.0
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.9e-135 485.0 734 44.8
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 9.3e-133 478.4 724 43.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.1e-132 477.2 642 47.0
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.6e-132 476.1 721 44.4
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.7e-131 472.2 711 44.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 8.7e-131 471.9 711 45.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.9e-130 470.7 749 43.9
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.9e-130 470.7 712 44.8
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.3e-129 468.0 780 42.6
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.1e-128 464.9 723 41.5
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.4e-128 464.5 728 43.3
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 4.0e-128 463.0 713 43.2
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.9e-128 462.2 711 44.2
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 7.6e-127 458.8 731 43.9
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 7.9e-124 448.7 651 45.6
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 1.8e-123 447.6 694 43.1
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.8e-123 447.6 591 48.4
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 8.7e-123 445.3 785 42.8
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 8.2e-121 438.7 724 43.9
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.8e-120 437.6 710 41.0
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.1e-120 436.4 715 40.7
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.5e-119 434.5 703 40.5
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 4.5e-119 433.0 725 43.0
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.9e-118 430.3 721 41.6
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.8e-118 429.9 727 40.6
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.1e-117 428.3 826 38.1
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 1.1e-117 428.3 731 42.7
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.5e-117 427.2 714 44.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 5.5e-117 426.0 730 41.8
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.1e-115 419.5 693 43.3
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 6.7e-115 419.1 711 40.5
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-114 417.9 584 47.3
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.3e-114 416.8 726 40.1
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.8e-113 413.7 761 38.8
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 6.9e-112 409.1 731 39.8
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.0e-111 407.5 742 41.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.6e-111 407.1 738 39.8
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 8.5e-110 402.1 726 40.6
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 8.5e-110 402.1 794 38.3
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 2.7e-108 397.1 518 47.7
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.6e-108 396.7 722 40.3
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.6e-108 396.7 669 43.2
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 7.9e-108 395.6 736 38.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.4e-107 394.8 722 39.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 2.3e-107 394.0 725 38.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.0e-106 391.0 712 39.3
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 5.7e-106 389.4 697 39.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 6.3e-105 386.0 635 42.5
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.0e-103 380.9 714 41.2
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 7.7e-103 379.0 644 42.1
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.4e-99 368.2 501 48.5
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 6.7e-99 365.9 678 41.0
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.7e-97 361.3 685 37.7
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 8.2e-97 359.0 683 37.6
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 8.2e-97 359.0 711 40.4
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 5.3e-96 356.3 653 40.1
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.6e-95 354.0 684 39.5
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 4.5e-95 353.2 682 40.6
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 7.7e-95 352.4 684 39.2
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 3.8e-94 350.1 694 37.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 3.8e-94 350.1 730 36.4
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 5.0e-94 349.7 685 37.5
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.0e-94 349.7 792 36.2
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 6.5e-94 349.4 684 38.5
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 6.5e-94 349.4 685 38.0
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 2.5e-93 347.4 687 39.4
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 3.2e-93 347.1 684 39.5
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 4.2e-93 346.7 680 38.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.2e-92 345.1 722 39.5
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 2.7e-92 344.0 679 38.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 3.0e-91 340.5 688 38.1
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 7.5e-90 335.9 690 36.7
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 9.7e-90 335.5 691 37.8
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.7e-89 334.7 711 35.3
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.2e-87 328.6 716 35.5
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.3e-86 325.1 716 34.4
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 7.2e-85 319.3 650 39.1
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.2e-84 318.5 392 45.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 6.8e-83 312.8 577 38.6
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.2e-82 312.0 305 55.1
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-79 302.0 714 35.4
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.0e-78 298.9 382 46.3
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.5e-77 295.0 696 34.2
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.4e-74 283.5 276 55.8
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 4.9e-73 280.0 625 36.6
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 3.8e-70 270.4 568 35.2
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 8.6e-70 269.2 279 50.9
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.5e-69 265.8 381 40.9
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 3.1e-67 260.8 589 34.3
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.0e-66 258.1 305 49.2
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 6.4e-65 253.1 331 44.7
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-64 251.9 293 48.8
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.0e-63 248.1 297 46.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 7.8e-63 246.1 703 32.3
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.3e-59 234.6 458 39.5
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.6e-58 231.1 644 33.7
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 3.7e-57 227.3 260 46.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 7.3e-53 213.0 620 31.3
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.4e-43 182.2 444 34.0
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.0e-42 178.3 140 63.6
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.4e-42 177.6 133 67.7
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.3e-37 161.0 206 43.2
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 9.3e-32 142.9 241 37.8
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.0e-31 140.2 188 46.3
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 7.3e-29 133.3 147 48.3
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.2e-26 125.9 259 36.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 7.6e-26 123.2 351 28.5
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.9e-24 118.6 165 47.3
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-21 109.4 85 64.7
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 9.0e-19 99.8 451 30.8
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.4e-18 97.8 314 33.4
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 4.6e-15 87.4 436 30.0
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 8.2e-12 76.6 63 61.9
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.1e-11 76.3 96 43.8
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-11 75.9 108 41.7
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.3e-09 69.3 61 52.5
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 2.2e-09 68.6 153 37.9
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.8e-09 67.8 44 68.2
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.9e-08 65.5 60 46.7


User provided reference genes

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