Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.4e-142 508.8 263 100.0
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 1.7e-82 310.1 263 66.5
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 3.5e-72 275.8 269 59.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 4.7e-69 265.4 269 58.4
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 1.8e-65 253.4 281 55.5
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 5.4e-65 251.9 273 58.6
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 5.9e-64 248.4 270 58.9
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.2e-61 240.7 268 56.3
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 2.6e-59 233.0 274 55.8
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 5.4e-57 225.3 260 53.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.6e-40 170.6 267 44.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 7.8e-40 168.3 267 43.8
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 9.9e-35 151.4 287 41.8
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 8.7e-31 138.3 288 40.6
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.1e-25 121.3 245 39.2
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.1e-25 121.3 280 37.1
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 9.3e-25 118.2 272 36.4
Lalb_Chr06g0164231 Lupinus albus HOM05D006494 ORTHO05D007787 1.6e-24 117.5 95 63.2
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.9e-22 110.5 282 36.2
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 7.3e-22 108.6 274 34.7
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 7.3e-22 108.6 273 37.0
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 9.6e-22 108.2 267 36.3
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.1e-21 107.1 280 34.6
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.8e-21 106.7 280 34.6
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 6.2e-21 105.5 275 37.5
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.2e-21 105.5 279 34.1
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.1e-20 104.8 284 34.5
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.4e-20 104.4 273 35.5
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 2.4e-20 103.6 266 36.1
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 4.0e-20 102.8 277 33.9
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.0e-20 102.8 277 32.9
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 9.0e-20 101.7 275 34.5
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.5e-19 100.9 267 32.6
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 2.6e-19 100.1 280 35.4
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.2e-18 97.1 269 34.2
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.2e-18 97.1 279 33.0
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.1e-17 94.7 287 33.1
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.9e-17 94.0 259 34.0
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.4e-17 93.6 273 32.2
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.4e-17 93.6 278 31.7
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.2e-17 93.2 236 34.7
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.2e-17 92.8 275 29.8
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.2e-17 92.8 263 32.7
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.2e-17 92.8 263 32.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 9.3e-17 91.7 282 31.9
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 9.3e-17 91.7 265 33.2
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.2e-16 91.3 272 31.6
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.2e-16 91.3 273 31.9
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.1e-16 90.5 279 30.8
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.1e-16 90.5 235 32.8
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.6e-16 89.4 278 31.3
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 4.6e-16 89.4 274 30.7
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 1.8e-15 87.4 255 29.0
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.0e-15 86.7 277 32.1
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 5.1e-15 85.9 268 31.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.1e-14 84.7 272 30.1
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 2.5e-14 83.6 260 30.8
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.5e-14 83.6 264 32.2
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.3e-14 83.2 278 32.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.3e-14 83.2 221 31.2
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 5.6e-14 82.4 255 30.2
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 5.6e-14 82.4 247 34.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 9.6e-14 81.6 278 32.4
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.3e-13 81.3 267 31.5
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.8e-13 79.3 219 32.4
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 4.8e-13 79.3 271 29.2
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 4.8e-13 79.3 264 30.7
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 6.2e-13 79.0 184 34.2
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 3.1e-12 76.6 232 32.8
TPR.G763 Trifolium pratense HOM05D006494 ORTHO05D007787 5.3e-12 75.9 63 66.7
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-11 74.3 194 34.5
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 1.5e-11 74.3 241 28.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 9.9e-11 71.6 246 30.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.3e-10 71.2 279 28.3
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.2e-10 70.5 167 32.3
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.2e-10 70.5 221 32.6
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 6.4e-10 68.9 112 35.7
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 8.4e-10 68.6 265 32.1
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 8.4e-10 68.6 285 29.1
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 4.2e-09 66.2 266 29.3
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 9.3e-09 65.1 270 29.6
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 9.3e-09 65.1 193 32.6
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.6e-08 64.3 266 28.9
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.1e-08 63.9 267 29.6
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.1e-08 63.9 267 28.5
arahy.Tifrunner.gnm1.ann1.P4DBMR Arachis hypogaea HOM05D062081 ORTHO05D007787 2.7e-08 63.5 301 30.6
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.7e-08 63.5 315 26.7
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.7e-08 63.5 255 28.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 3.5e-08 63.2 268 27.6
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.5e-08 63.2 194 32.0
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.6e-08 62.8 255 26.3
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 6.0e-08 62.4 189 31.2
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.0e-07 61.6 216 29.6
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.0e-07 61.6 223 30.0
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 1.0e-07 61.6 255 29.4
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.0e-07 60.1 263 28.1
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 3.0e-07 60.1 252 27.8
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 5.1e-07 59.3 221 29.9
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 5.1e-07 59.3 263 27.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.9e-06 57.4 282 28.4
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.5e-06 57.0 112 38.4
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 9.6e-06 55.1 256 27.7


User provided reference genes

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