Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 7.3e-88 327.4 190 100.0
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 4.1e-75 285.0 192 91.1
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 2.7e-74 282.3 188 87.8
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 9.6e-64 247.3 189 80.4
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 1.5e-61 240.0 189 77.8
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 7.6e-61 237.7 191 79.1
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 2.4e-59 232.6 192 72.9
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 1.3e-55 220.3 187 71.1
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 2.8e-55 219.2 212 69.3
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 2.6e-53 212.6 206 69.4
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 7.6e-53 211.1 206 69.9
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 8.4e-52 207.6 189 73.5
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 3.2e-51 205.7 194 71.1
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 4.6e-50 201.8 209 70.8
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 2.5e-48 196.1 142 90.8
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 9.6e-48 194.1 202 62.9
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 2.1e-47 193.0 206 66.5
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 8.7e-41 171.0 155 77.4
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 3.2e-35 152.5 202 53.0
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 5.5e-35 151.8 202 54.5
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 9.3e-35 151.0 203 54.2
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 9.3e-35 151.0 204 53.4
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 1.6e-34 150.2 207 56.0
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 1.6e-34 150.2 207 56.0
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 3.5e-34 149.1 203 52.2
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 7.9e-34 147.9 206 52.4
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 3.0e-33 146.0 208 56.7
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 3.9e-33 145.6 196 51.0
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 6.7e-33 144.8 203 51.2
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 1.1e-32 144.1 195 53.8
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.9e-32 143.3 205 51.7
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 1.9e-32 143.3 205 52.2
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.5e-32 142.9 205 52.2
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 3.3e-32 142.5 207 50.7
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.3e-32 142.5 206 45.1
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 5.7e-32 141.7 213 54.5
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 7.4e-32 141.4 206 57.3
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 7.4e-32 141.4 204 50.0
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 9.6e-32 141.0 195 46.2
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 1.3e-31 140.6 206 56.8
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.6e-31 140.2 205 57.1
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.6e-31 140.2 206 56.8
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 2.1e-31 139.8 210 57.1
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 2.8e-31 139.4 204 49.5
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 3.7e-31 139.0 195 52.8
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.1e-30 136.0 213 54.0
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.1e-30 135.6 194 46.9
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 6.9e-30 134.8 204 48.5
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 9.0e-30 134.4 185 53.0
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.2e-29 134.0 204 50.0
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.2e-29 134.0 204 50.0
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.2e-29 134.0 200 47.5
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 1.5e-29 133.7 208 49.5
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 2.0e-29 133.3 207 54.6
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 3.4e-29 132.5 203 47.8
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 4.5e-29 132.1 188 53.7
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 5.9e-29 131.7 204 47.5
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 5.9e-29 131.7 204 47.5
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.9e-29 131.7 213 53.1
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.9e-29 131.7 207 54.6
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 7.6e-29 131.3 207 54.6
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 7.6e-29 131.3 208 49.5
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.2e-28 129.8 204 45.1
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.2e-28 129.8 204 45.1
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 2.2e-28 129.8 198 47.0
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 2.9e-28 129.4 196 50.5
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.9e-28 129.4 203 51.2
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 2.9e-28 129.4 206 54.4
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 5.0e-28 128.6 205 47.3
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 5.0e-28 128.6 196 42.3
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 6.5e-28 128.3 207 54.6
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.1e-27 127.5 197 50.3
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 1.4e-27 127.1 199 42.7
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.4e-27 127.1 207 49.8
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.5e-27 126.3 197 49.7
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.2e-27 125.9 213 52.6
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.2e-27 125.6 191 49.7
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.2e-26 124.0 197 49.2
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 1.2e-26 124.0 208 47.6
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 1.6e-26 123.6 207 53.6
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.1e-26 123.2 191 49.2
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.1e-26 123.2 191 49.2
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 2.1e-26 123.2 206 46.6
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 2.7e-26 122.9 207 47.3
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 3.5e-26 122.5 207 52.2
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 4.6e-26 122.1 205 48.3
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 4.6e-26 122.1 195 53.8
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 7.9e-26 121.3 206 47.6
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 1.3e-25 120.6 201 41.3
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 1.8e-25 120.2 181 51.9
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.8e-25 120.2 198 47.0
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.8e-25 120.2 196 47.4
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.3e-25 119.8 199 50.3
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.3e-25 119.8 213 46.0
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 3.9e-25 119.0 201 40.8
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 5.1e-25 118.6 180 47.8
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.1e-24 117.5 191 52.4
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 1.5e-24 117.1 204 46.6
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.5e-24 117.1 191 52.4
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 2.5e-24 116.3 185 45.4
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.5e-24 116.3 191 51.8
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 2.5e-24 116.3 194 55.7
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 4.3e-24 115.5 193 48.2
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 4.3e-24 115.5 177 42.9
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 1.3e-23 114.0 139 48.2
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.6e-23 113.6 177 50.8
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 3.7e-23 112.5 181 54.1
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 4.8e-23 112.1 193 40.4
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 4.8e-23 112.1 185 43.2
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 8.2e-23 111.3 186 43.5
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 1.4e-22 110.5 194 43.8
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 4.1e-22 109.0 185 43.2
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 5.3e-22 108.6 207 50.2
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 6.9e-22 108.2 196 43.9
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 6.9e-22 108.2 188 44.7
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 9.0e-22 107.8 185 42.2
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 2.0e-21 106.7 207 50.2
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 2.6e-21 106.3 194 43.8
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.6e-21 106.3 174 46.6
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 3.4e-21 105.9 181 38.7
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 4.5e-21 105.5 181 39.2
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 7.7e-21 104.8 180 40.6
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 1.0e-20 104.4 181 47.0
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.0e-20 104.4 206 51.9
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.3e-20 104.0 185 42.2
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 2.2e-20 103.2 195 40.5
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 2.2e-20 103.2 176 39.8
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 2.9e-20 102.8 184 39.1
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 2.9e-20 102.8 174 41.4
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.9e-20 102.8 195 47.2
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 3.8e-20 102.4 207 49.8
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 5.0e-20 102.1 195 40.0
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 5.0e-20 102.1 185 42.2
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 1.9e-19 100.1 176 42.0
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 1.9e-19 100.1 199 45.7
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 1.9e-19 100.1 194 42.8
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 3.2e-19 99.4 194 42.8
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 4.2e-19 99.0 196 40.3
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 4.2e-19 99.0 208 49.5
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 5.5e-19 98.6 185 41.1
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 7.2e-19 98.2 199 48.7
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 7.2e-19 98.2 170 45.3
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 1.2e-18 97.4 181 42.0
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.2e-18 97.4 172 40.7
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 4.6e-18 95.5 194 38.1
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 4.6e-18 95.5 187 42.8
VMungo0251G0932 Vigna mungo HOM05D002831 ORTHO05D004341 4.6e-18 95.5 144 57.6
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 6.1e-18 95.1 169 40.8
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 1.0e-17 94.4 186 42.5
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 1.0e-17 94.4 200 48.0
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 1.4e-17 94.0 192 45.3
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 1.8e-17 93.6 186 39.8
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 3.9e-17 92.4 189 40.2
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 8.8e-17 91.3 131 55.7
HPP92_008924 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.5e-16 90.5 170 41.2
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.5e-16 90.5 179 38.5
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 2.0e-16 90.1 169 45.0
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 2.0e-16 90.1 169 40.8
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 4.3e-16 89.0 198 44.4
FAN10G0429 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.7e-16 88.6 211 45.5
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 1.3e-15 87.4 172 54.1
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.3e-15 87.4 179 38.5
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 2.2e-15 86.7 205 48.8
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 3.7e-15 85.9 170 41.8
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 4.8e-15 85.5 186 37.6
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 1.1e-14 84.3 150 44.0
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 5.9e-13 78.6 197 47.2
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 1.3e-12 77.4 128 43.0
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 3.8e-12 75.9 102 48.0
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 8.5e-12 74.7 190 45.8
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 3.2e-11 72.8 92 63.0
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 3.2e-11 72.8 130 49.2
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 7.2e-11 71.6 176 35.8
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 1.6e-10 70.5 97 52.6
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 1.6e-10 70.5 97 52.6
Lsat_1_v5_gn_9_56481 Lactuca sativa HOM05D002831 ORTHO05D004341 2.1e-10 70.1 172 48.8
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 3.6e-10 69.3 180 48.9
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 5.1e-09 65.5 90 47.8
Os06g0106900 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 3.3e-08 62.8 171 46.2
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 8.2e-07 58.2 87 74.7
Carub.0007s1527 Capsella rubella HOM05D002831 ORTHO05D004341 4.1e-06 55.8 77 50.6


User provided reference genes

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