Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 3.4e-217 758.1 387 100.0
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 9.2e-114 414.5 265 82.6
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 8.9e-109 397.9 261 78.2
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 4.1e-106 389.0 261 79.3
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 5.6e-103 378.6 260 76.9
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 2.9e-99 366.3 268 73.5
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 4.2e-98 362.5 263 73.0
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 7.1e-98 361.7 264 72.0
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 3.0e-96 356.3 260 71.9
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 4.2e-90 335.9 270 68.5
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 1.6e-89 334.0 265 67.5
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 3.5e-89 332.8 273 67.4
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 3.0e-88 329.7 212 77.8
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 5.1e-88 328.9 254 68.1
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 1.5e-87 327.4 212 76.9
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 4.3e-87 325.9 261 65.9
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 1.6e-86 323.9 212 75.0
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.6e-86 323.9 212 74.1
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 2.1e-86 323.6 212 75.0
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 3.6e-86 322.8 273 63.7
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 3.6e-86 322.8 214 76.2
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 4.8e-86 322.4 244 66.8
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 4.8e-86 322.4 273 63.7
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 8.1e-86 321.6 222 72.5
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 8.1e-86 321.6 214 75.2
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 1.1e-85 321.2 212 73.6
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.1e-85 321.2 214 74.8
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.1e-85 321.2 214 75.2
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 1.4e-85 320.9 215 74.9
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 3.1e-85 319.7 266 66.5
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 5.3e-85 318.9 214 74.8
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 9.0e-85 318.2 243 66.7
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 9.0e-85 318.2 262 66.0
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 1.2e-84 317.8 211 74.9
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 1.5e-84 317.4 244 66.0
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 2.0e-84 317.0 212 74.5
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 5.8e-84 315.5 212 75.5
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 7.6e-84 315.1 212 74.1
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 7.6e-84 315.1 223 71.7
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 9.9e-84 314.7 262 65.3
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 9.9e-84 314.7 269 64.3
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 1.3e-83 314.3 212 74.1
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 1.7e-83 313.9 214 73.8
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 1.7e-83 313.9 222 70.7
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 2.2e-83 313.5 212 74.1
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 2.9e-83 313.2 215 71.6
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 2.9e-83 313.2 235 68.9
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 4.9e-83 312.4 220 72.7
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 8.4e-83 311.6 196 78.1
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 1.1e-82 311.2 206 75.2
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 1.1e-82 311.2 239 67.8
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 1.1e-82 311.2 215 71.2
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 1.4e-82 310.8 262 63.7
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 1.4e-82 310.8 213 69.5
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 1.9e-82 310.5 261 63.2
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 2.4e-82 310.1 261 63.6
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 4.2e-82 309.3 262 63.4
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 7.1e-82 308.5 265 63.0
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 9.3e-82 308.1 234 67.1
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 9.3e-82 308.1 257 64.6
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 1.2e-81 307.8 220 68.6
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 2.1e-81 307.0 261 64.0
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 2.7e-81 306.6 222 67.6
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 2.7e-81 306.6 212 72.6
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 3.5e-81 306.2 215 71.2
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 6.0e-81 305.4 214 70.1
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 6.0e-81 305.4 238 67.6
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.0e-80 304.7 261 61.3
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 1.0e-80 304.7 222 68.9
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 1.3e-80 304.3 212 73.6
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 1.3e-80 304.3 212 68.9
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 1.3e-80 304.3 238 68.1
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 1.8e-80 303.9 212 71.2
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 3.0e-80 303.1 217 71.0
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 3.9e-80 302.8 204 74.5
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 5.1e-80 302.4 216 68.1
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 8.7e-80 301.6 265 62.6
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 4.3e-79 299.3 259 64.1
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 4.3e-79 299.3 216 66.7
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 9.6e-79 298.1 216 66.2
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.3e-78 297.7 261 60.2
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 1.1e-77 294.7 261 61.7
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 1.8e-77 293.9 221 67.9
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 1.8e-77 293.9 269 60.6
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 1.8e-77 293.9 214 67.8
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 6.9e-77 292.0 212 70.8
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 1.2e-76 291.2 256 58.6
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 2.0e-76 290.4 213 66.7
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 6.4e-75 285.4 190 73.7
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 4.2e-74 282.7 218 63.8
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 7.1e-74 282.0 245 63.7
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 4.6e-73 279.3 213 65.3
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 4.6e-73 279.3 215 65.1
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 5.6e-71 272.3 196 69.4
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 1.2e-68 264.6 206 68.0
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 3.4e-68 263.1 213 61.0
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 7.6e-68 261.9 213 62.9
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 2.9e-67 260.0 212 60.8
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 4.9e-67 259.2 212 62.7
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 2.5e-66 256.9 173 74.6
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 2.5e-66 256.9 172 73.8
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 7.1e-66 255.4 238 58.0
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 1.8e-64 250.8 196 66.3
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 4.8e-62 242.7 179 67.0
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 1.4e-58 231.1 178 66.3
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 2.5e-58 230.3 216 54.6
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 1.4e-45 188.0 231 45.0
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 6.5e-43 179.1 112 75.0
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 7.0e-37 159.1 192 44.3
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 5.9e-36 156.0 197 44.2
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 6.5e-35 152.5 144 55.6
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 4.2e-34 149.8 119 64.7
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 5.2e-32 142.9 186 41.9
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 1.5e-26 124.8 137 51.8
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 9.8e-23 112.1 56 96.4
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 5.9e-20 102.8 82 58.5
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 5.0e-19 99.8 68 63.2
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 8.9e-16 89.0 166 37.3
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 2.6e-15 87.4 63 60.3
CDE06G1299 Ceratophyllum demersum HOM05D005950 ORTHO05D130736 6.3e-14 82.8 95 50.5
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 9.2e-13 79.0 169 35.5
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 5.0e-11 73.2 168 35.1
AL4G33820 Arabidopsis lyrata HOM05D005950 ORTHO05D080589 2.8e-09 67.4 82 46.3
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 1.8e-08 64.7 71 52.1
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 2.0e-07 61.2 43 67.4
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 3.7e-06 57.0 32 81.2


User provided reference genes

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