Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 0.0e+00 1182.9 596 100.0
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 7.4e-304 1046.6 659 82.4
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 2.8e-279 964.9 641 78.5
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 2.4e-278 961.8 641 77.4
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.7e-276 955.7 641 77.1
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 4.7e-274 947.6 635 78.0
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 5.9e-245 850.9 604 73.5
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 3.5e-237 825.1 654 67.9
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 3.7e-231 805.1 655 65.6
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 4.6e-229 798.1 671 63.8
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.9e-227 792.7 664 64.9
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 6.2e-226 787.7 654 63.9
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.8e-225 786.2 651 64.4
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 4.0e-225 785.0 648 63.0
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 1.7e-223 779.6 663 63.0
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 2.9e-223 778.9 662 62.7
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 3.7e-223 778.5 437 89.9
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 4.6e-221 771.5 645 62.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 4.6e-221 771.5 649 63.5
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 7.8e-221 770.8 660 62.0
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.0e-220 770.4 649 63.3
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.1e-219 766.9 649 63.3
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.5e-219 766.5 649 62.7
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 3.6e-218 761.9 613 65.4
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 1.4e-217 760.0 651 60.8
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 3.1e-217 758.8 635 62.4
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 2.0e-216 756.1 703 59.6
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 2.6e-216 755.7 640 61.6
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 1.3e-215 753.4 419 89.5
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 1.7e-215 753.1 650 62.5
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 8.3e-215 750.7 688 59.7
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 2.7e-213 745.7 624 63.5
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 2.3e-212 742.7 664 59.8
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 5.2e-209 731.5 655 60.6
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 1.2e-208 730.3 444 83.3
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.1e-206 723.8 650 59.7
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 6.0e-205 718.0 635 60.9
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 7.8e-205 717.6 602 63.5
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.5e-203 713.4 647 58.1
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 4.0e-201 705.3 618 63.1
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.5e-200 703.4 741 54.8
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 7.6e-200 701.0 763 55.3
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.1e-198 697.2 683 55.8
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 5.4e-198 694.9 668 55.2
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 1.5e-192 676.8 654 57.6
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 1.4e-185 653.7 524 65.8
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 1.4e-185 653.7 682 53.8
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 4.8e-178 628.6 664 55.6
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.1e-177 627.5 525 62.1
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 2.7e-173 612.8 635 54.2
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 2.4e-169 599.7 642 54.4
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 3.0e-164 582.8 454 68.9
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.7e-162 575.9 658 51.7
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 6.3e-162 575.1 535 59.3
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.0e-160 570.1 657 52.5
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 2.9e-159 566.2 542 58.3
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 5.0e-159 565.5 521 59.5
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 1.1e-158 564.3 334 79.6
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.4e-158 563.9 522 59.2
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.2e-158 562.8 681 50.7
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.2e-158 562.4 681 50.7
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 7.2e-158 561.6 397 73.3
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 1.0e-156 557.8 646 46.0
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 2.0e-152 543.5 445 64.9
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 4.5e-152 542.3 455 65.7
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 2.2e-151 540.0 423 68.3
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 2.2e-151 540.0 448 63.2
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 1.4e-150 537.3 438 64.8
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 4.1e-145 519.2 697 47.9
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.0e-144 516.9 707 46.5
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 2.0e-144 516.9 457 60.6
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 6.8e-140 501.9 512 55.7
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 3.5e-136 489.6 296 78.7
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 1.2e-131 474.6 246 92.3
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 1.2e-128 464.5 508 53.9
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 3.0e-124 449.9 629 43.9
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 5.7e-123 445.7 542 48.2
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 5.9e-120 435.6 612 43.1
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.4e-114 415.6 457 54.5
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.7e-112 410.2 457 54.5
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 6.0e-112 409.1 428 53.3
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 4.7e-109 399.4 609 40.1
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 3.9e-95 353.2 259 69.9
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 8.4e-82 308.9 265 64.2
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 6.9e-76 289.3 175 84.6
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 9.3e-73 278.9 169 79.9
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.2e-67 261.9 152 82.2
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 2.0e-67 261.2 349 42.1
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 1.0e-66 258.8 177 74.0
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 1.3e-63 248.4 133 91.0
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.3e-62 243.4 242 57.9
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 2.1e-61 241.1 159 74.2
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 3.1e-60 237.3 174 68.4
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 6.9e-60 236.1 175 68.0
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 3.4e-59 233.8 176 68.8
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.4e-57 228.4 115 92.2
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 7.1e-57 226.1 180 63.9
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 1.5e-51 208.4 547 31.6
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 1.3e-50 205.3 107 91.6
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 2.2e-50 204.5 174 59.2
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 2.9e-50 204.1 180 58.9
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 6.5e-50 203.0 176 58.0
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 6.5e-50 203.0 174 58.0
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 1.1e-49 202.2 174 60.3
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 1.4e-49 201.8 100 96.0
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 1.9e-49 201.4 174 56.9
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 1.1e-46 192.2 307 40.1
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 2.8e-37 161.0 360 33.9
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 8.2e-37 159.5 175 50.3
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 2.4e-36 157.9 90 81.1
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 7.0e-36 156.4 114 68.4
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 2.0e-35 154.8 101 75.2
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 2.6e-35 154.5 114 68.4
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 4.2e-33 147.1 124 61.3
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 1.6e-32 145.2 115 60.0
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 8.0e-32 142.9 115 62.6
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 2.3e-31 141.4 114 65.8
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.0e-23 115.9 231 35.9
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 3.0e-23 114.4 83 67.5
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 4.0e-23 114.0 82 67.1
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.4e-22 110.9 79 68.4
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.7e-21 107.5 78 71.8
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.1e-20 104.4 65 75.4
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 7.7e-19 99.8 199 30.7
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 2.1e-16 91.7 162 45.1
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 8.0e-16 89.7 56 73.2
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 4.1e-12 77.4 60 63.3
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 5.4e-12 77.0 58 67.2
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 1.7e-10 72.0 41 80.5
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 1.1e-09 69.3 210 31.9
RcHm_v2.0_Chr7g0190461 Rosa chinensis HOM05D002332 ORTHO05D002509 7.2e-09 66.6 196 28.6
MD06G1143900 Malus domestica HOM05D002332 ORTHO05D002509 2.8e-08 64.7 167 29.3
CSS0008874 Camellia sinensis var. sinensis HOM05D005151 ORTHO05D006322 3.6e-08 64.3 291 23.0
Duzib084G0667 Durio zibethinus HOM05D002332 ORTHO05D002509 8.0e-08 63.2 203 25.6
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 8.0e-08 63.2 203 25.1
GSVIVG01008513001 Vitis vinifera HOM05D002332 ORTHO05D002509 1.0e-07 62.8 201 26.4
Haze_07236 Corylus avellana HOM05D002332 ORTHO05D002509 1.4e-07 62.4 199 27.6
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 1.4e-07 62.4 204 24.0
FvH4_5g07940 Fragaria vesca HOM05D002332 ORTHO05D002509 1.8e-07 62.0 256 26.6
FAN08G0156 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.8e-07 62.0 254 26.0
FAN18G1292 Fragaria x ananassa HOM05D002332 ORTHO05D002509 1.8e-07 62.0 256 26.6
Solyc12g009030.2 Solanum lycopersicum HOM05D005151 ORTHO05D006322 4.0e-07 60.8 294 21.8
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 5.2e-07 60.5 227 23.8
TAR629G2976 Trochodendron aralioides HOM05D002332 ORTHO05D002509 5.2e-07 60.5 167 26.3
Cfa018843 Carpinus fangiana HOM05D002332 ORTHO05D002509 8.9e-07 59.7 196 26.5
Glyma.05G046600 Glycine max HOM05D002332 ORTHO05D002509 8.9e-07 59.7 210 23.8
Sopen12g023530 Solanum pennellii HOM05D002634 ORTHO05D003100 8.9e-07 59.7 311 22.5
QL10p004201 Quercus lobata HOM05D002332 ORTHO05D002509 1.5e-06 58.9 168 27.4
Dinv01308 Davidia involucrata HOM05D002332 ORTHO05D002509 2.0e-06 58.5 167 26.3
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 2.0e-06 58.5 349 19.8
HPP92_004726 Vanilla planifolia HOM05D000002 ORTHO05D006339 2.0e-06 58.5 205 22.9
Gohir.D03G113300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 2.6e-06 58.2 203 23.2
Gorai.003G119500 Gossypium raimondii HOM05D002332 ORTHO05D002509 2.6e-06 58.2 203 23.2
Medtr4g103760 Medicago truncatula HOM05D002332 ORTHO05D002509 2.6e-06 58.2 235 23.4
GSVIVG01035793001 Vitis vinifera HOM05D000836 ORTHO05D000709 2.6e-06 58.2 232 23.3
Dinv04870 Davidia involucrata HOM05D002332 ORTHO05D002509 3.4e-06 57.8 195 25.6
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.4e-06 57.8 390 19.5
SalBow2G0244 Salvia bowleyana HOM05D004669 ORTHO05D005767 3.4e-06 57.8 259 23.6
Aqoxy3G04079 Aquilegia oxysepala HOM05D002332 ORTHO05D002509 4.4e-06 57.4 176 24.4
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 4.4e-06 57.4 39 74.4
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 4.4e-06 57.4 57 49.1
Dinv36800 Davidia involucrata HOM05D005151 ORTHO05D006322 5.7e-06 57.0 230 22.2
Glyma.17G165900 Glycine max HOM05D002634 ORTHO05D003100 5.7e-06 57.0 335 20.9
Potri.015G093300 Populus trichocarpa HOM05D002332 ORTHO05D002509 5.7e-06 57.0 203 22.7
CiPaw.11G009200 Carya illinoinensis HOM05D002332 ORTHO05D002509 7.5e-06 56.6 167 27.5
Glyma.05G100500 Glycine max HOM05D002634 ORTHO05D003100 7.5e-06 56.6 335 21.2
Gohir.A03G053700 Gossypium hirsutum HOM05D002332 ORTHO05D002509 7.5e-06 56.6 200 23.0
QL06p040017 Quercus lobata HOM05D002634 ORTHO05D003100 7.5e-06 56.6 334 21.0


User provided reference genes

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