Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 9.1e-292 1006.1 492 100.0
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 4.3e-257 891.0 485 89.1
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 1.5e-254 882.5 490 88.6
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 3.7e-253 877.9 491 86.8
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 5.2e-247 857.4 495 83.8
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 2.1e-243 845.5 495 83.2
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 6.6e-242 840.5 494 82.6
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 4.3e-233 811.2 505 80.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 9.0e-231 803.5 481 82.3
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 4.9e-229 797.7 461 84.2
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 1.1e-223 780.0 497 75.9
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 1.7e-221 772.7 462 78.8
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 1.0e-205 720.3 405 84.2
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.1e-204 716.8 459 74.3
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 3.5e-203 711.8 488 70.9
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 6.7e-202 707.6 486 70.4
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 1.3e-200 703.4 458 72.1
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 4.6e-195 684.9 489 69.7
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 5.7e-193 677.9 435 73.6
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 5.7e-193 677.9 483 68.1
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.7e-192 676.4 493 68.2
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 2.2e-192 676.0 429 72.7
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 4.1e-191 671.8 491 65.6
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 4.1e-191 671.8 490 67.3
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 7.7e-190 667.5 466 68.0
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 7.7e-190 667.5 488 67.6
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 1.7e-189 666.4 497 67.6
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 5.5e-188 661.4 535 60.2
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 5.5e-188 661.4 497 65.2
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 4.7e-187 658.3 486 65.4
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 1.0e-186 657.1 491 65.8
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.0e-186 657.1 473 67.7
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 2.3e-186 656.0 506 64.6
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 8.8e-186 654.1 471 66.7
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 1.5e-185 653.3 480 69.0
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 2.6e-185 652.5 488 65.0
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 3.3e-185 652.1 489 64.8
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.3e-184 650.2 486 65.2
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 6.3e-184 647.9 489 65.4
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 8.2e-184 647.5 492 64.4
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 8.2e-184 647.5 466 67.0
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 1.2e-182 643.7 446 65.5
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.5e-182 643.3 537 61.6
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 1.0e-181 640.6 445 69.7
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 1.7e-181 639.8 487 62.8
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 8.5e-181 637.5 475 63.2
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 7.2e-180 634.4 448 65.6
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 2.7e-179 632.5 501 61.5
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 1.0e-178 630.6 448 65.0
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.4e-177 625.2 492 63.8
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 5.7e-177 624.8 499 62.1
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 2.2e-176 622.9 429 66.9
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 3.7e-176 622.1 487 61.2
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 3.7e-176 622.1 448 65.4
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 6.3e-176 621.3 448 65.2
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 6.3e-176 621.3 490 61.8
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 2.4e-175 619.4 487 61.6
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 4.1e-175 618.6 494 61.5
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 5.3e-175 618.2 492 63.6
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 2.0e-174 616.3 490 61.6
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 1.1e-172 610.5 510 59.8
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 1.1e-172 610.5 454 65.6
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 5.5e-172 608.2 448 62.5
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.4e-170 603.6 513 60.0
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 3.0e-170 602.4 507 59.4
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 9.7e-169 597.4 497 60.8
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 3.7e-168 595.5 488 61.3
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 2.4e-167 592.8 465 61.9
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 2.4e-167 592.8 527 56.7
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 3.1e-167 592.4 390 69.7
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 3.1e-167 592.4 437 63.8
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 7.0e-167 591.3 495 60.4
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 1.2e-166 590.5 419 65.6
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 2.7e-166 589.3 405 67.7
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 5.0e-165 585.1 493 59.2
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 8.5e-165 584.3 497 59.2
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 1.2e-163 580.5 485 60.4
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 2.7e-163 579.3 449 65.0
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 7.5e-161 571.2 516 58.1
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 1.4e-159 567.0 468 60.3
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 1.7e-157 560.1 494 59.7
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 2.3e-157 559.7 422 63.5
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 3.8e-157 558.9 378 69.3
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 8.0e-155 551.2 412 63.3
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 8.0e-155 551.2 463 57.7
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 5.7e-153 545.0 398 66.1
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.3e-148 529.3 516 55.2
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 8.6e-141 504.6 394 61.7
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 4.7e-139 498.8 352 68.2
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 2.3e-138 496.5 494 52.8
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 8.3e-136 488.0 296 74.3
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 8.3e-136 488.0 360 66.4
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 5.4e-135 485.3 329 69.0
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 3.9e-133 479.2 555 48.3
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 4.3e-132 475.7 417 56.1
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 6.4e-128 461.8 409 55.7
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 2.1e-123 446.8 367 56.1
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 4.7e-123 445.7 387 61.0
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 2.4e-119 433.3 418 52.2
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 9.2e-119 431.4 330 59.1
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 1.2e-110 404.4 279 70.6
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 2.9e-104 383.3 246 72.4
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 2.9e-104 383.3 246 72.4
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 9.0e-98 361.7 251 70.5
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 3.4e-97 359.8 251 70.1
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.3e-93 347.8 370 47.8
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 5.1e-93 345.9 345 49.0
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.2e-86 324.7 334 51.2
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 1.3e-85 321.2 197 75.6
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 1.3e-85 321.2 288 56.9
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 1.1e-84 318.2 243 65.4
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 7.2e-79 298.9 174 76.4
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 5.7e-68 262.7 428 36.0
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 1.3e-67 261.5 242 53.7
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 6.3e-67 259.2 235 54.0
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 8.5e-64 248.8 340 40.6
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 2.4e-58 230.7 193 63.2
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 7.0e-58 229.2 213 54.5
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 6.5e-56 222.6 187 61.0
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 1.4e-42 178.3 106 77.4
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.8e-37 161.4 92 75.0
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 5.7e-36 156.4 305 35.1
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 1.1e-31 142.1 74 83.8
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 2.3e-29 134.4 77 76.6
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 3.1e-29 134.0 340 30.3
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 2.2e-27 127.9 129 51.9
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 3.4e-20 104.0 55 76.4
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 3.5e-17 94.0 373 24.1
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 1.5e-12 78.6 102 46.1
Prupe.8G040900 Prunus persica HOM05D005921 ORTHO05D007374 6.4e-11 73.2 102 43.1
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 1.2e-06 58.9 97 28.9


User provided reference genes

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