Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.1e-93 346.7 184 100.0
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.2e-71 273.5 184 79.3
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 9.9e-66 253.8 184 74.5
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 3.2e-64 248.8 187 73.8
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 1.0e-54 217.2 174 64.4
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.2e-48 195.7 195 54.4
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.2e-48 195.7 191 54.5
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 3.2e-48 195.7 160 58.8
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 5.4e-48 194.9 191 52.4
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.2e-47 193.7 187 55.1
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 7.9e-47 191.0 184 55.4
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 3.9e-46 188.7 197 50.8
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 8.7e-46 187.6 197 50.3
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.5e-45 186.8 192 51.6
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 2.5e-45 186.0 159 53.5
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 7.4e-45 184.5 170 54.1
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.3e-44 183.7 159 53.5
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.3e-44 183.7 160 55.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 2.1e-44 183.0 180 51.7
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 3.7e-44 182.2 159 52.2
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 4.8e-44 181.8 159 52.8
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.1e-43 180.6 159 52.2
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.8e-43 179.9 157 51.6
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 4.0e-43 178.7 159 53.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 6.9e-43 177.9 159 50.9
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 6.9e-43 177.9 174 52.3
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 9.0e-43 177.6 156 54.5
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.2e-42 177.2 168 50.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.5e-42 176.8 194 46.9
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 2.0e-42 176.4 172 51.7
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 2.0e-42 176.4 174 51.7
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 2.6e-42 176.0 166 50.6
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.6e-42 176.0 157 56.1
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 3.4e-42 175.6 196 46.9
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 1.0e-41 174.1 159 53.5
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.0e-41 174.1 185 48.1
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.3e-41 173.7 186 48.9
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 2.2e-41 172.9 186 48.9
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 2.2e-41 172.9 159 51.6
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 2.2e-41 172.9 161 51.6
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.9e-41 172.6 159 50.3
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 3.8e-41 172.2 180 49.4
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.8e-41 172.2 159 52.2
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 4.9e-41 171.8 159 52.2
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 6.5e-41 171.4 159 52.2
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 6.5e-41 171.4 183 47.0
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 8.4e-41 171.0 159 49.7
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.1e-40 170.6 159 50.9
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.4e-40 170.2 195 45.1
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.4e-40 170.2 156 50.0
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.4e-40 170.2 159 52.2
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.4e-40 170.2 159 52.2
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.9e-40 169.9 193 45.6
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.9e-40 169.9 159 52.8
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.9e-40 169.9 159 51.6
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.9e-40 169.9 159 52.2
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.9e-40 169.9 154 50.6
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 2.5e-40 169.5 183 48.1
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 4.2e-40 168.7 184 49.5
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 5.5e-40 168.3 159 51.6
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 7.1e-40 167.9 171 49.7
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 7.1e-40 167.9 167 49.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.6e-39 166.8 157 47.1
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.1e-39 166.4 159 50.3
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 2.7e-39 166.0 183 47.5
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.5e-39 165.6 159 48.4
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 3.5e-39 165.6 164 47.0
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 6.0e-39 164.9 164 46.3
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.9e-39 164.5 157 47.1
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.0e-38 164.1 159 50.3
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.0e-38 164.1 159 50.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.0e-38 164.1 159 49.7
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.3e-38 163.7 183 47.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 1.3e-38 163.7 156 50.0
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.8e-38 163.3 153 49.7
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 1.8e-38 163.3 156 48.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 2.3e-38 162.9 183 46.4
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 2.3e-38 162.9 188 46.8
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 2.3e-38 162.9 159 47.8
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.3e-38 162.9 155 49.0
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 3.0e-38 162.5 183 45.9
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.0e-38 162.5 154 47.4
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 3.9e-38 162.2 187 43.3
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 3.9e-38 162.2 174 47.1
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 5.1e-38 161.8 157 45.9
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 5.1e-38 161.8 186 42.5
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.7e-38 161.4 157 46.5
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 8.7e-38 161.0 171 45.0
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.1e-37 160.6 173 43.9
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.5e-37 160.2 180 45.6
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.9e-37 159.8 171 44.4
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 2.5e-37 159.5 159 49.7
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 3.3e-37 159.1 173 43.4
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 4.3e-37 158.7 159 49.7
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 4.3e-37 158.7 159 48.4
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 5.7e-37 158.3 159 49.7
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.4e-37 157.9 156 48.1
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.3e-36 157.1 183 46.4
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.3e-36 157.1 160 49.4
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.8e-36 156.0 194 44.8
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 4.8e-36 155.2 183 45.9
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 4.8e-36 155.2 157 49.7
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 6.2e-36 154.8 193 44.0
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 8.2e-36 154.5 159 49.7
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.4e-35 153.7 187 41.2
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.5e-34 150.2 158 44.3
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 2.0e-34 149.8 157 44.6
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 2.0e-34 149.8 165 44.2
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 7.6e-34 147.9 177 40.7
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 9.3e-32 141.0 164 40.2
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.9e-27 124.8 160 38.8
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 6.9e-27 124.8 160 38.8
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.5e-26 123.6 164 41.5
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.7e-25 120.2 151 39.7
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 8.5e-25 117.9 128 46.1
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 2.1e-23 113.2 91 58.2
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 3.6e-23 112.5 84 60.7
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 6.7e-22 108.2 155 36.8
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.3e-21 105.9 84 56.0
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 6.3e-20 101.7 110 45.5
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.4e-19 100.5 112 48.2
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.4e-19 100.5 84 52.4
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.8e-19 100.1 109 42.2
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 2.3e-14 83.2 75 56.0
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 5.1e-14 82.0 79 50.6
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.7e-12 77.0 104 37.5
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.7e-12 75.9 80 47.5
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.1e-11 74.3 75 46.7
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 5.9e-10 68.6 73 43.8
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 8.5e-09 64.7 150 26.7
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.9e-08 63.5 44 59.1
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 1.9e-08 63.5 96 33.3
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 3.2e-08 62.8 67 46.3


User provided reference genes

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