Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.3e-134 482.3 245 100.0
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.1e-91 340.5 243 73.3
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 6.5e-89 331.3 243 72.4
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.5e-88 329.3 243 71.6
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 7.9e-79 297.7 246 67.1
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.8e-78 296.6 246 65.9
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 9.7e-77 290.8 245 65.7
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.2e-71 273.9 247 62.8
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.6e-63 245.7 202 66.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.0e-62 242.7 202 67.3
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.4e-53 212.6 200 61.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 8.3e-52 208.0 183 60.7
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.8e-51 206.8 180 60.6
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.0e-49 201.1 181 59.1
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.3e-49 200.7 200 55.5
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.3e-49 200.7 203 54.7
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.7e-49 200.3 186 60.2
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 2.9e-49 199.5 126 82.5
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.8e-49 199.1 185 57.3
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 6.6e-49 198.4 195 55.9
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 8.6e-49 198.0 182 59.9
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.1e-48 197.6 202 55.0
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.1e-48 197.6 183 57.9
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.5e-48 197.2 191 57.6
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.5e-48 196.4 158 63.9
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 3.3e-48 196.1 119 80.7
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 5.6e-48 195.3 173 61.3
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 9.5e-48 194.5 201 54.7
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.1e-47 193.4 182 58.8
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 2.1e-47 193.4 176 59.7
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.1e-47 193.4 123 78.9
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.1e-47 193.4 123 78.9
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 6.1e-47 191.8 207 50.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 6.1e-47 191.8 202 55.4
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.0e-46 191.0 202 55.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.4e-46 190.7 121 78.5
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.8e-46 190.3 162 62.3
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.8e-46 190.3 199 51.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-46 189.9 124 75.8
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.0e-46 189.5 220 54.1
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 5.2e-46 188.7 201 54.7
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 6.8e-46 188.3 203 54.7
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 8.9e-46 188.0 177 58.8
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 8.9e-46 188.0 210 52.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 2.6e-45 186.4 117 78.6
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.6e-45 186.4 142 69.7
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.6e-45 186.4 109 85.3
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 3.4e-45 186.0 116 82.8
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 4.4e-45 185.7 114 78.9
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 4.4e-45 185.7 120 80.0
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 4.4e-45 185.7 123 77.2
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 4.4e-45 185.7 117 79.5
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 5.7e-45 185.3 198 53.5
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 7.5e-45 184.9 197 51.3
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 7.5e-45 184.9 119 79.0
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 9.8e-45 184.5 180 58.3
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 9.8e-45 184.5 135 72.6
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 9.8e-45 184.5 203 52.7
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 9.8e-45 184.5 121 78.5
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.3e-44 184.1 186 55.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.2e-44 183.3 125 74.4
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.2e-44 183.3 100 89.0
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 8.3e-44 181.4 127 70.1
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 8.3e-44 181.4 127 70.1
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.3e-44 181.4 171 59.6
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 8.3e-44 181.4 132 71.2
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 8.3e-44 181.4 172 60.5
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 8.3e-44 181.4 103 86.4
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 8.3e-44 181.4 219 48.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.1e-43 181.0 153 64.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.4e-43 179.9 142 67.6
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.2e-43 179.5 110 80.0
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 3.2e-43 179.5 178 55.6
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 4.1e-43 179.1 153 64.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.1e-43 179.1 210 51.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 5.4e-43 178.7 118 78.0
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 5.4e-43 178.7 118 78.0
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 5.4e-43 178.7 118 78.0
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 7.0e-43 178.3 118 78.0
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.0e-43 178.3 176 56.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 9.2e-43 177.9 176 59.7
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 9.2e-43 177.9 109 82.6
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 9.2e-43 177.9 103 85.4
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.2e-43 177.9 107 81.3
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.2e-42 177.6 105 83.8
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.2e-42 177.6 110 80.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.6e-42 177.2 110 80.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.7e-42 176.4 178 54.5
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.6e-42 175.6 210 50.5
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 5.9e-42 175.3 103 83.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 5.9e-42 175.3 103 79.6
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.3e-41 174.1 104 82.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.7e-41 173.7 100 86.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.3e-41 173.3 121 71.9
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.9e-40 170.2 104 78.8
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.9e-40 170.2 104 78.8
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.5e-40 167.9 107 78.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.2e-39 167.5 223 47.1
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 4.7e-39 165.6 126 68.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 1.2e-37 161.0 102 78.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 9.8e-37 157.9 102 75.5
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.3e-33 147.5 104 68.3
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 8.6e-33 144.8 101 68.3
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 3.3e-32 142.9 103 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.2e-31 141.0 101 68.3
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 7.5e-29 131.7 82 80.5
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.2e-28 130.2 98 63.3
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 8.3e-28 128.3 70 87.1
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.7e-26 123.2 74 79.7
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 7.8e-26 121.7 193 44.6
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.2e-18 97.8 93 50.5
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.3e-17 94.4 55 85.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.5e-16 90.1 44 90.9
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.5e-16 90.1 62 75.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 3.6e-15 86.3 74 54.1
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.1e-11 74.7 45 75.6
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.2e-11 72.8 44 77.3


User provided reference genes

Program Settings