Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10629_v3 Cicer arietinum L. HOM05D014548 ORTHO05D016940 2.3e-98 362.5 176 100.0
Psat6g188320 Pisum sativum HOM05D014548 ORTHO05D016940 6.8e-50 201.4 171 59.6
TPR.G40257 Trifolium pratense HOM05D014548 ORTHO05D016940 8.1e-43 177.9 146 61.6
TPR.G39494 Trifolium pratense HOM05D014548 ORTHO05D016940 3.1e-42 176.0 187 54.5
TPR.G39493 Trifolium pratense HOM05D014548 ORTHO05D016940 3.4e-41 172.6 139 60.4
Lalb_Chr17g0341421 Lupinus albus HOM05D014548 ORTHO05D016940 7.6e-25 118.2 149 41.6
VMungo0434G0001 Vigna mungo HOM05D014548 ORTHO05D016940 1.4e-15 87.4 152 38.8
TPR.G30575 Trifolium pratense HOM05D014548 ORTHO05D016940 2.7e-14 83.2 111 45.0
Medtr1g097070 Medicago truncatula HOM05D014548 ORTHO05D016940 4.8e-11 72.4 49 71.4
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 7.6e-09 65.1 142 34.5
Lalb_Chr17g0341411 Lupinus albus HOM05D000155 ORTHO05D000022 1.0e-08 64.7 164 30.5
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 3.8e-08 62.8 148 33.1
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 8.5e-08 61.6 143 33.6
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-07 60.5 129 32.6
COL.COLO4_36152 Corchorus olitorius HOM05D000003 ORTHO05D000022 1.9e-07 60.5 123 33.3
Ciclev10021474m.g Citrus clementina HOM05D000003 ORTHO05D000022 2.5e-07 60.1 149 32.2
SHI34455 Sapria himalayana HOM05D004990 ORTHO05D000022 3.2e-07 59.7 102 39.2
AUR62028578 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.2e-07 59.3 147 31.3
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 4.2e-07 59.3 139 27.3
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 5.5e-07 58.9 139 27.3
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.2e-07 58.5 129 34.1
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 7.2e-07 58.5 150 29.3
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 9.3e-07 58.2 150 33.3
Atru.chr1.1484 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-06 57.4 146 30.8
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.6e-06 57.4 124 32.3
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 1.6e-06 57.4 142 30.3
Glyma.13G224100 Glycine max HOM05D000062 ORTHO05D000043 1.6e-06 57.4 132 31.8
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 57.0 142 31.7
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-06 57.0 121 35.5
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 2.1e-06 57.0 139 26.6
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 142 34.5
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 139 28.8
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-06 56.6 121 35.5
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-06 56.6 121 35.5
Prupe.4G223300 Prunus persica HOM05D000279 ORTHO05D000022 2.7e-06 56.6 146 31.5
Lalb_Chr09g0330401 Lupinus albus HOM05D000155 ORTHO05D000022 4.6e-06 55.8 147 32.0
Ca_11781_v3 Cicer arietinum L. HOM05D000155 ORTHO05D000022 6.1e-06 55.5 156 30.8
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 6.1e-06 55.5 160 27.5
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 7.9e-06 55.1 141 32.6
Atru.chr7.381 Acer truncatum HOM05D000003 ORTHO05D002259 7.9e-06 55.1 131 32.8
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 7.9e-06 55.1 141 32.6
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 7.9e-06 55.1 139 30.9
Sabra09G0015300 Salix brachista HOM05D000003 ORTHO05D000006 7.9e-06 55.1 139 30.2


User provided reference genes

Program Settings