Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.9e-102 375.9 202 100.0
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 1.7e-58 229.9 219 64.8
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 4.1e-57 225.3 221 60.6
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 6.4e-50 201.4 191 62.8
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 4.1e-49 198.7 193 64.8
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 4.1e-49 198.7 190 62.6
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.7e-47 193.4 187 62.6
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 8.6e-47 191.0 210 56.7
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 7.3e-46 188.0 216 55.1
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.6e-45 186.8 188 59.0
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 6.8e-44 181.4 146 68.5
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.2e-42 176.4 208 55.8
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 8.4e-42 174.5 213 55.9
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-41 174.1 205 56.6
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 1.1e-41 174.1 212 56.6
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.4e-41 172.9 189 56.1
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 4.2e-41 172.2 183 61.7
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 4.2e-41 172.2 147 65.3
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 6.0e-40 168.3 204 51.5
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.7e-39 166.8 210 53.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.3e-39 166.4 160 60.0
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 5.1e-39 165.2 180 56.1
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.7e-39 164.5 161 60.2
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 3.3e-38 162.5 197 52.3
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 5.6e-38 161.8 161 59.6
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.8e-36 156.8 199 53.8
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.8e-36 156.8 188 55.3
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 3.1e-36 156.0 204 55.9
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 9.0e-36 154.5 214 50.0
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 1.2e-35 154.1 179 54.2
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 5.8e-35 151.8 190 50.0
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 5.8e-35 151.8 203 48.8
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 7.6e-35 151.4 172 57.0
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 3.8e-34 149.1 197 57.9
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 2.4e-33 146.4 183 51.9
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 5.4e-33 145.2 195 55.9
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 9.3e-33 144.4 203 54.2
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.6e-32 143.7 190 48.9
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 4.6e-32 142.1 170 50.0
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.3e-31 140.6 178 48.3
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.5e-30 137.1 171 55.0
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 1.9e-30 136.7 191 44.0
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 1.9e-30 136.7 188 52.1
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 4.3e-30 135.6 181 49.7
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 5.6e-30 135.2 167 51.5
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 2.8e-29 132.9 188 45.7
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 6.2e-29 131.7 138 51.4
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 1.1e-28 131.0 193 45.1
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.4e-28 130.6 177 50.3
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.4e-28 130.6 183 46.4
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.4e-28 130.6 192 46.4
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.8e-28 130.2 177 50.3
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.8e-28 130.2 177 47.5
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.8e-28 130.2 172 47.7
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 2.4e-28 129.8 157 52.2
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 3.1e-28 129.4 176 46.6
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 4.0e-28 129.0 193 45.1
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 5.3e-28 128.6 195 46.2
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.2e-27 127.5 166 46.4
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 2.6e-27 126.3 194 43.8
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.6e-27 126.3 191 44.5
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 5.8e-27 125.2 188 52.1
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 5.8e-27 125.2 188 52.1
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.3e-26 124.0 176 43.2
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 1.7e-26 123.6 149 49.0
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 2.2e-26 123.2 187 50.8
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 2.9e-26 122.9 161 49.1
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 4.9e-26 122.1 162 48.8
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 8.4e-26 121.3 154 45.5
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 8.4e-26 121.3 173 46.2
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 8.4e-26 121.3 176 45.5
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 1.4e-25 120.6 181 46.4
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 1.9e-25 120.2 163 46.6
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.9e-25 120.2 184 44.0
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 4.2e-25 119.0 187 47.1
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 7.1e-25 118.2 219 38.8
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 9.3e-25 117.9 171 48.5
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.2e-24 117.5 173 51.4
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 1.2e-24 117.5 143 47.6
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.6e-24 117.1 143 47.6
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 6.0e-24 115.2 196 41.8
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 6.0e-24 115.2 185 45.9
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 7.9e-24 114.8 192 48.4
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 7.9e-24 114.8 179 46.9
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 1.3e-23 114.0 178 43.3
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 3.9e-23 112.5 177 52.0
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 6.7e-23 111.7 172 45.9
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 8.7e-23 111.3 212 44.3
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 8.7e-23 111.3 194 42.3
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 1.1e-22 110.9 178 45.5
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.3e-22 109.4 189 46.0
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 4.3e-22 109.0 173 45.7
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 9.6e-22 107.8 175 44.6
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 9.6e-22 107.8 175 44.6
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 9.6e-22 107.8 175 44.6
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 2.1e-21 106.7 183 48.1
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 2.8e-21 106.3 204 39.2
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 2.8e-21 106.3 214 41.1
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.8e-21 106.3 193 40.9
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 4.8e-21 105.5 199 41.2
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 4.8e-21 105.5 199 41.2
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 6.2e-21 105.1 178 42.1
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 6.2e-21 105.1 149 45.6
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.1e-20 104.4 151 45.0
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 1.8e-20 103.6 203 42.9
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 3.1e-20 102.8 178 42.7
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 3.1e-20 102.8 178 42.7
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 3.1e-20 102.8 152 42.8
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 5.3e-20 102.1 187 42.2
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 5.3e-20 102.1 180 41.1
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 5.3e-20 102.1 165 44.2
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 6.9e-20 101.7 179 44.1
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 6.9e-20 101.7 205 44.9
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 9.0e-20 101.3 164 42.1
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 4.5e-19 99.0 171 48.0
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 2.2e-18 96.7 170 40.0
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 3.8e-18 95.9 178 38.2
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 4.9e-18 95.5 178 38.8
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.9e-17 93.6 149 44.3
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.9e-17 93.6 166 41.0
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 1.9e-17 93.6 182 44.0
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 3.2e-17 92.8 181 37.0
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 3.2e-17 92.8 185 42.7
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 5.5e-17 92.0 149 44.3
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.6e-16 90.5 170 38.8
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 3.5e-16 89.4 194 36.6
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 3.5e-16 89.4 172 37.2
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 6.0e-16 88.6 168 40.5
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.3e-15 87.4 123 50.4
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 1.8e-15 87.0 174 39.7
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 2.3e-15 86.7 207 35.7
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 6.7e-15 85.1 113 46.9
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 3.3e-14 82.8 209 34.0
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 4.3e-14 82.4 128 48.4
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 8.2e-13 78.2 163 36.2
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 8.2e-13 78.2 156 39.7
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 4.1e-12 75.9 158 39.2
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 9.0e-12 74.7 176 42.0
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 7.6e-11 71.6 129 47.3
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 2.2e-10 70.1 118 44.1
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.2e-09 65.9 179 34.6
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.0e-07 61.2 122 39.3
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.3e-07 60.8 145 33.1
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 2.3e-07 60.1 144 34.0
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 1.9e-06 57.0 56 53.6
HPP92_003138 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.3e-06 55.8 141 33.3


User provided reference genes

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