Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.0e-74 282.3 140 100.0
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 5.4e-56 221.1 138 82.6
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 5.1e-54 214.5 142 78.2
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 5.1e-54 214.5 143 78.3
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 9.6e-45 183.7 145 66.2
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.2e-44 183.3 99 88.9
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.4e-43 179.9 143 66.4
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.4e-43 179.9 146 63.7
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.6e-42 175.6 146 62.3
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 2.2e-41 172.6 112 75.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.4e-40 169.9 114 71.9
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 2.7e-39 165.6 137 59.9
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 8.7e-38 160.6 106 71.7
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.8e-35 152.9 125 61.6
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.5e-34 149.8 98 73.5
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.0e-34 149.4 108 68.5
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.6e-34 149.1 108 65.7
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.4e-34 148.7 104 70.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 5.8e-34 147.9 111 65.8
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 5.8e-34 147.9 126 61.9
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 5.8e-34 147.9 107 71.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 7.6e-34 147.5 119 60.5
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.8e-33 145.2 103 68.0
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 3.8e-33 145.2 108 66.7
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 4.9e-33 144.8 107 67.3
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 4.9e-33 144.8 98 71.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 6.4e-33 144.4 140 54.3
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.1e-32 143.7 112 63.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.1e-32 143.7 105 65.7
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.1e-32 143.7 102 67.6
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 2.4e-32 142.5 104 67.3
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.2e-32 142.1 144 51.4
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 3.2e-32 142.1 98 69.4
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 4.2e-32 141.7 117 59.8
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.2e-32 141.7 111 64.0
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 4.2e-32 141.7 108 64.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 5.4e-32 141.4 140 52.9
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 5.4e-32 141.4 140 52.9
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 5.4e-32 141.4 125 58.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 7.1e-32 141.0 111 62.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 7.1e-32 141.0 108 64.8
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 9.3e-32 140.6 111 61.3
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 9.3e-32 140.6 126 56.3
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.2e-31 140.2 143 57.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.2e-31 140.2 108 63.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 1.6e-31 139.8 107 66.4
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 1.6e-31 139.8 103 67.0
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.6e-31 139.8 113 60.2
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 2.1e-31 139.4 107 62.6
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 2.1e-31 139.4 115 62.6
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 2.1e-31 139.4 104 64.4
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 2.7e-31 139.0 132 52.3
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.7e-31 139.0 111 61.3
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.7e-31 139.0 111 61.3
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 2.7e-31 139.0 97 69.1
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 3.5e-31 138.7 110 60.9
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 7.9e-31 137.5 103 65.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 7.9e-31 137.5 122 59.0
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 7.9e-31 137.5 109 65.1
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.0e-30 137.1 112 60.7
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.3e-30 136.7 111 60.4
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.3e-30 136.7 121 58.7
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.8e-30 136.3 191 42.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.8e-30 136.3 103 63.1
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.8e-30 136.3 118 61.0
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.8e-30 136.3 110 57.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.3e-30 136.0 136 51.5
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 2.3e-30 136.0 117 58.1
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 3.9e-30 135.2 98 66.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 5.1e-30 134.8 107 60.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 5.1e-30 134.8 117 56.4
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 6.7e-30 134.4 111 59.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 6.7e-30 134.4 104 61.5
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-29 133.3 107 60.7
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.5e-29 133.3 107 60.7
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.5e-29 133.3 115 57.4
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.9e-29 132.9 98 66.3
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.9e-29 132.9 117 55.6
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.9e-29 132.9 104 62.5
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 3.3e-29 132.1 117 59.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 4.3e-29 131.7 117 59.0
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 7.4e-29 131.0 94 68.1
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.3e-28 130.2 113 55.8
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 2.1e-28 129.4 130 51.5
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.1e-28 129.4 95 62.1
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.1e-28 129.4 106 56.6
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.1e-28 129.4 121 52.1
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.8e-28 129.0 113 58.4
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 4.8e-28 128.3 130 50.0
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 8.1e-28 127.5 122 56.6
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 8.1e-28 127.5 107 58.9
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.1e-27 127.1 113 55.8
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.1e-27 125.6 107 58.9
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 5.3e-27 124.8 104 59.6
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 5.3e-27 124.8 116 54.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 9.0e-27 124.0 116 51.7
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.2e-26 123.6 170 42.4
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.5e-26 123.2 118 49.2
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 2.6e-26 122.5 107 57.0
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.7e-25 119.8 94 61.7
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 2.9e-25 119.0 124 50.8
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 6.4e-25 117.9 95 57.9
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.4e-24 116.7 98 57.1
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.0e-22 110.5 163 39.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 7.4e-21 104.4 84 58.3
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 4.8e-20 101.7 73 64.4
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 6.2e-20 101.3 97 54.6
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.2e-18 97.1 120 46.7
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 2.6e-18 95.9 118 38.1
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 3.2e-16 89.0 61 70.5
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 3.5e-15 85.5 112 42.0
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 3.5e-15 85.5 138 33.3
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 6.0e-15 84.7 54 70.4
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.0e-14 84.0 96 39.6
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 2.3e-14 82.8 65 58.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 8.7e-14 80.9 54 64.8
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.5e-13 79.3 100 35.0
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.2e-10 70.5 59 57.6
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 2.9e-09 65.9 91 37.4
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 7.9e-07 57.8 44 59.1


User provided reference genes

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