Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 4.4e-113 411.4 218 100.0
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 1.2e-94 350.1 216 85.2
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 4.0e-90 335.1 218 81.7
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 8.9e-90 334.0 213 81.7
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.7e-88 329.7 214 80.4
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 2.9e-88 328.9 210 81.9
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 2.7e-86 322.4 213 80.8
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 1.0e-85 320.5 213 80.3
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 2.3e-85 319.3 214 80.4
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 5.1e-85 318.2 211 79.6
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 2.5e-84 315.8 213 77.5
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 5.6e-84 314.7 213 79.3
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 1.5e-73 280.0 162 89.5
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 2.7e-70 269.2 211 70.6
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 4.6e-70 268.5 207 70.0
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 8.7e-69 264.2 207 70.0
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 3.3e-68 262.3 218 67.0
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 3.6e-67 258.8 218 63.8
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 6.2e-67 258.1 207 69.1
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 6.9e-66 254.6 215 65.6
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 9.0e-66 254.2 217 65.4
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 1.2e-65 253.8 207 65.7
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 1.2e-65 253.8 214 64.5
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 1.5e-65 253.4 207 66.2
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 2.0e-65 253.1 218 63.8
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 4.5e-65 251.9 207 66.2
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 4.5e-65 251.9 207 65.7
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 5.8e-65 251.5 218 62.4
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 9.9e-65 250.8 207 66.7
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 2.2e-64 249.6 205 65.4
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 4.9e-64 248.4 206 66.0
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 8.4e-64 247.7 207 64.7
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.1e-63 247.3 207 66.2
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 1.9e-63 246.5 207 62.3
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 7.1e-63 244.6 215 65.6
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 9.3e-63 244.2 218 61.0
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.2e-62 243.8 207 64.7
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 1.2e-62 243.8 213 64.8
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 1.6e-62 243.4 207 64.7
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.1e-62 243.0 205 64.9
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.1e-62 243.0 207 64.7
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.1e-62 243.0 207 64.7
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 3.5e-62 242.3 218 61.5
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 4.6e-62 241.9 215 62.8
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 7.9e-62 241.1 207 63.3
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 7.9e-62 241.1 218 61.5
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 7.9e-62 241.1 218 61.5
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 7.9e-62 241.1 208 64.9
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 7.9e-62 241.1 207 64.3
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.0e-61 240.7 218 63.3
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.8e-61 240.0 208 63.9
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 1.8e-61 240.0 217 60.4
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 2.3e-61 239.6 220 63.2
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 3.0e-61 239.2 207 64.7
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 3.9e-61 238.8 207 63.3
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.9e-61 238.8 218 61.0
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 3.9e-61 238.8 218 60.6
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 6.7e-61 238.0 207 63.3
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 6.7e-61 238.0 218 57.8
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 8.7e-61 237.7 189 65.6
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 8.7e-61 237.7 207 63.3
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 8.7e-61 237.7 207 63.8
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 8.7e-61 237.7 207 63.8
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 1.1e-60 237.3 189 65.1
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 2.5e-60 236.1 207 61.8
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 2.5e-60 236.1 208 61.1
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 3.3e-60 235.7 215 61.9
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 4.3e-60 235.3 217 62.2
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 4.3e-60 235.3 212 60.8
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 5.6e-60 235.0 182 65.9
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 5.6e-60 235.0 182 65.9
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 7.4e-60 234.6 207 62.3
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 7.4e-60 234.6 218 57.8
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 1.6e-59 233.4 213 62.4
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 2.1e-59 233.0 191 63.4
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 2.1e-59 233.0 207 63.3
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 2.8e-59 232.6 208 61.5
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 2.8e-59 232.6 192 61.5
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 2.8e-59 232.6 216 59.3
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 4.8e-59 231.9 216 59.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 8.1e-59 231.1 207 62.8
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.1e-58 230.7 216 60.2
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.4e-58 230.3 207 61.4
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.8e-58 229.9 216 57.9
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 1.8e-58 229.9 222 59.5
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 5.3e-58 228.4 207 62.3
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 5.3e-58 228.4 244 55.3
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 6.9e-58 228.0 198 62.6
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.5e-57 226.9 218 57.3
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 5.8e-57 224.9 207 59.4
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 7.6e-57 224.6 202 61.9
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 8.4e-56 221.1 207 59.4
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.9e-55 219.9 214 56.5
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 1.9e-55 219.9 175 64.6
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 3.2e-55 219.2 206 61.2
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 1.2e-54 217.2 217 57.1
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 6.7e-53 211.5 195 55.9
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 9.6e-52 207.6 219 57.1
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 1.3e-51 207.2 194 55.2
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.8e-51 206.1 165 62.4
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.8e-51 206.1 165 62.4
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 3.8e-48 195.7 186 55.9
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 6.5e-48 194.9 157 63.1
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 4.2e-47 192.2 370 38.1
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 1.6e-46 190.3 146 73.3
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 1.0e-45 187.6 155 61.9
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 1.3e-40 170.6 192 51.6
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 3.2e-39 166.0 127 67.7
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 5.5e-39 165.2 156 55.1
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 9.3e-39 164.5 127 71.7
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 1.8e-37 160.2 203 43.8
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.8e-37 160.2 127 64.6
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.6e-35 153.7 129 69.8
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 1.6e-35 153.7 192 44.8
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 3.4e-33 146.0 121 66.9
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 8.5e-32 141.4 131 60.3
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 3.0e-29 132.9 120 56.7
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 5.1e-29 132.1 103 66.0
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.0e-28 130.2 127 57.5
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 2.0e-25 120.2 207 34.8
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.4e-23 114.0 127 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 1.2e-22 110.9 183 41.5
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 4.4e-20 102.4 74 68.9
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.1e-18 97.8 82 67.1
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.5e-16 88.2 82 62.2
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 2.7e-14 83.2 79 51.9
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.4e-13 80.9 81 59.3
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.8e-13 80.5 48 81.2
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 4.0e-13 79.3 185 30.3
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.0e-12 77.0 63 63.5
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.8e-11 73.2 46 78.3


User provided reference genes

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